Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02592 ATGGCTGTGGTGAAACTGCCACCAAATGTTTCAGTTCCAGCAGTGTTGGTGTTTGGAGATTCGATCGTGGATACGGGCAACAACAACAACAACTTGTTAACACCAGCTCGGTGCAATTTCCCACCATATGGGAAAGATTTTAAGGGAGGGAAACCAACTGGCCGATTTAGCAATGGAAAGGTTCCATCAGACCTTGTAGTTGAAGAATTAGGCATCAAAGAGTTTTTACCAGCATACTTGGATCCAAATCTCCAGCCTAGTGAATTGCTCACTGGTGTATGCTTTGCATCTGGTGGCGTTGGATATGATCCTTTGACTTCACAAACATCGTCAGTTATATCGCTATCCAGTCAACGAGACTTATTCAAAGCATACATAGCGAAACTAAAAGGCCTAGTTGGAGAGGACAGAACAAATTTCATCATAGCCAACAGTGTTTATCTTGTGGTAGTAGGCAGCAATGACATTTCCAACACATACTTCTTATCTCGTATTAGACAAGTGCAATATGATTTTCCTACTTATGCTGACTTTCTAGTCAAATCAGCTTCTAATTTCTTGAAGGAAATATATCAACTAGGGGCACGAAGGATCGGAGTATTCAGTGTGCCGCCAATTGGGTGTTTGCCATTTCAGAGAACAGCGGCAGGAGGAATAGCCAGAAAATGTGTCACAAAATACAATGACGCAGTAGAGTTATTCAACAGAAAATTGTCAAAGGAACTGGATTCTCTTAACCAGAACTATCCAAATAGCAGGATGGTTTATATTGATGTTTACAACCCTCTGCTTGACATCATTGCAAACTACCAAAAATATGGCCATGAAGTCGGAGACAGGGGGTGCTGTGGCACAGGCACAATAGAGGTTGTGTCGTTATGCAATCGTTTTGTTCCTCTGTGTCCCAACGTTTTGGAGTATGTCTTTTGGGATAGTTTTCACCCTACTGAAAGCGTTTACAAACAGCTCGTAGTTCCTATTGTTCAAAAATATTTGAACGATTTCTTGTAA 1011 0.4135 MAVVKLPPNVSVPAVLVFGDSIVDTGNNNNNLLTPARCNFPPYGKDFKGGKPTGRFSNGKVPSDLVVEELGIKEFLPAYLDPNLQPSELLTGVCFASGGVGYDPLTSQTSSVISLSSQRDLFKAYIAKLKGLVGEDRTNFIIANSVYLVVVGSNDISNTYFLSRIRQVQYDFPTYADFLVKSASNFLKEIYQLGARRIGVFSVPPIGCLPFQRTAAGGIARKCVTKYNDAVELFNRKLSKELDSLNQNYPNSRMVYIDVYNPLLDIIANYQKYGHEVGDRGCCGTGTIEVVSLCNRFVPLCPNVLEYVFWDSFHPTESVYKQLVVPIVQKYLNDFL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02592 336 Pfam GDSL-like Lipase/Acylhydrolase 15 323 IPR001087 GO:0016788
Rops9g02592 336 PANTHER GDSL ESTERASE/LIPASE EXL3 12 324 - -
Rops9g02592 336 FunFam GDSL esterase/lipase APG 4 332 - -
Rops9g02592 336 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 15 26 IPR008265 GO:0006629|GO:0016298
Rops9g02592 336 Gene3D SGNH hydrolase 7 331 IPR036514 -
Rops9g02592 336 CDD SGNH_plant_lipase_like 13 324 IPR035669 -
Rops9g02592 336 SUPERFAMILY SGNH hydrolase 146 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02592 Rops-Chr9 48593440 48597024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02592 9 333 Pollen Coat Proteome AT1G75910 42.378 4.75e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02592 - - gmx:100776769 550.821