Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02587 ATGGTTGTTTTTATGAAGCTCCCTTCTTCTCCTCAATCTTCTTTTCCCACTTCAATTTACACCACACTTCTTCGATTGACACTGTTGTTTGCTGTTTCCTGCAAAACAAATGCTGTTGTAAAACTGCCACCAAATGTTTCGATTCCAGCAGTGTTGGTGTTTGGAGATTCAATCATGGATACTGGCAATAACAACAACATAAAAACACAAGCTCGGTGCAATTTTCCACCATATGGGAAAGATTTTGAGGGAGGGAAACCAACTGGCCGATTCAGCAACGGAAAGGTTCCATCAGACCTTGTAGTTGAAGAATTAGGCATTAAAGAGTTACTGCCAGCATACTTGGATCCAAATCTCCAGCCTAGTGAATTGGCCACTGGTGTGTGCTTTGCATCTGGTGGCGCCGGATACGATCCTTTGACTTCACAATTAGCGCCAGCTATACCACTATCAACCCAACTAGACTTATTCAAAGAATACATTGGGAAGCTTAAAGGATACATTGGAGAGGATAGAACAAACTTCATCCTAGCTAACAGTCTTTGTCTTGTGGTATTAGGCAGCAATGACATTTCCAACACATACTTCTTGTCTCGTGTTAGACAAACGCAATATAATTTTCCTTCTTATGCTGACTTTATGGTCAGTTCAGCTTCTAATTTCTTCAAGGAATTATATCAACTTGGTGCACGAAGGATTGGAGTATTCAATGCGCCCCCTATTGGGTGTGTGCCATTTCAGAGAACAATAGCAGGAGGAATAACAAGAACATGTGTTGAAAAGTACAACGATGCAGTGGTGTTATTTAACAGCAAACTTTCAAAGGAGATTGATTCGCTTAATCAGAAATTTCCAAACAGCAGGATGGTTTACTTTGATGTTTACAACCCTCTGCTTGATATCATTGTAAACAACCAGAAATATGGTTATAATGTCGGAAACAGAGGTTGCTGTGGCACAGGCACAATTGAGGTTACGTTGTTATGCAACCATTTGGAACCCACGTGTCCCAACGTTTTGGATTATGTGTTTTGGGACAGCTTTCACCCTACTGAAAGGGTTTACAGAAACCTCGTACCTCGTCTTCTACAGAAATATATATACCAGTTCGAGTGA 1116 0.4077 MVVFMKLPSSPQSSFPTSIYTTLLRLTLLFAVSCKTNAVVKLPPNVSIPAVLVFGDSIMDTGNNNNIKTQARCNFPPYGKDFEGGKPTGRFSNGKVPSDLVVEELGIKELLPAYLDPNLQPSELATGVCFASGGAGYDPLTSQLAPAIPLSTQLDLFKEYIGKLKGYIGEDRTNFILANSLCLVVLGSNDISNTYFLSRVRQTQYNFPSYADFMVSSASNFFKELYQLGARRIGVFNAPPIGCVPFQRTIAGGITRTCVEKYNDAVVLFNSKLSKEIDSLNQKFPNSRMVYFDVYNPLLDIIVNNQKYGYNVGNRGCCGTGTIEVTLLCNHLEPTCPNVLDYVFWDSFHPTERVYRNLVPRLLQKYIYQFE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02587 371 SUPERFAMILY SGNH hydrolase 50 364 - -
Rops9g02587 371 Pfam GDSL-like Lipase/Acylhydrolase 51 357 IPR001087 GO:0016788
Rops9g02587 371 CDD SGNH_plant_lipase_like 49 366 IPR035669 -
Rops9g02587 371 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 51 62 IPR008265 GO:0006629|GO:0016298
Rops9g02587 371 FunFam GDSL esterase/lipase APG 40 367 - -
Rops9g02587 371 Gene3D SGNH hydrolase 41 366 IPR036514 -
Rops9g02587 371 PANTHER GDSL ESTERASE/LIPASE EXL3 30 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02587 Rops-Chr9 48545712 48548947 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02587 24 364 Pollen Coat Proteome AT1G75910 41.279 7.71e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02587 - - gmx:100776769 560.836