Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02581 ATGTATCACTTATTCATAGTTGTTTTGGTTTTCTTTGCCAACAGAGTTGCCATCGCTGCAGCTGCTAATGGAGTATTTCCAGCAGTGTTTGCATTTGGAGACTCAATCCTTGATACGGGAAATAACAACAACCTTCTAACCTTAACTAAGTGCAATTTTCCTCCGTATGGAAGGGATTTCTTTGGTGGAATACCAACTGGAAGATTCTGTGATGGAAAAGTTCCCTCAGATTTGATAGCTGAGGCTCTGGGAATCAAAGCAACGTTGCCAGCATATCTGGATCCAAACTTACGGGCTCAAGACCTTCCTACTGGGGTAAGTTTTGCATCTGGCGGCTCAGGGAATGATGATCTCACAGCCAGCATGGAGGGAGTCTTATCACTAACCGCCCAACTACGACTTTTCGAAGATTACATGGCAAGGCTTAGAGCGATTGTTGGACAACAGAGAATGAATTTCATCATAACCAACAGCTTGTACCTGTTTTCATCGGGGAACAATGACATTGCACTTACTTATCCTTTCACCTTAAGGAGTTCGCTGCTTTTTCCTACATATGCCGATCTTTTAGTTGGTTCCGCTTCAACTTTCCTCAGGAATCTATATCAACATGGAGCACGACATGTGTGGGTTCTAAGTACATTGCCACTGGGATGCTTGCCTGGAGCTAGAACTGTAGTGGGGGGACCTATGAGGTGGTGTCAACCCCTTCTCAATGTACATGCACAGATGTTCAACGGCAAGTTAGCATCAACGGTTTCATCTATTAGGACAAGCTTTCCCAATTACGACGTTAGGTTCATTGATGTCTATACTCCTCTGTTTAATCTCATACAGAATCCTTTAGGAGCAGGGTTTGTGAACGCCGCGAACGGTTGTTGTGGGAGTGGGACACTTGAACTTGGAGAGTTATGTAACATATTCAGTGGCTCATGTCTAAATCCTTCAGCATACGTTTTCTGGGATTCTGGCCATCCAACTCAGAGAGCTTATCAGCTAACTGTCTCTGCTATACTACAAAAATACAATATTTCAAGCTCTTAA 1044 0.4358 MYHLFIVVLVFFANRVAIAAAANGVFPAVFAFGDSILDTGNNNNLLTLTKCNFPPYGRDFFGGIPTGRFCDGKVPSDLIAEALGIKATLPAYLDPNLRAQDLPTGVSFASGGSGNDDLTASMEGVLSLTAQLRLFEDYMARLRAIVGQQRMNFIITNSLYLFSSGNNDIALTYPFTLRSSLLFPTYADLLVGSASTFLRNLYQHGARHVWVLSTLPLGCLPGARTVVGGPMRWCQPLLNVHAQMFNGKLASTVSSIRTSFPNYDVRFIDVYTPLFNLIQNPLGAGFVNAANGCCGSGTLELGELCNIFSGSCLNPSAYVFWDSGHPTQRAYQLTVSAILQKYNISSS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02581 347 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Rops9g02581 347 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 29 40 IPR008265 GO:0006629|GO:0016298
Rops9g02581 347 SUPERFAMILY SGNH hydrolase 107 340 - -
Rops9g02581 347 FunFam GDSL esterase/lipase APG 18 343 - -
Rops9g02581 347 Gene3D SGNH hydrolase 14 345 IPR036514 -
Rops9g02581 347 PANTHER GDSL ESTERASE/LIPASE EXL3 9 336 - -
Rops9g02581 347 Pfam GDSL-like Lipase/Acylhydrolase 29 336 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02581 Rops-Chr9 48321731 48323459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02581 1 340 Pollen Coat Proteome AT1G75910 40.290 2.85e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02581 - - aip:107646231 441.425