Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02576 ATGGCAGCTATTGCTACAGTGATGCTCATGATGTTGTCCTTCACTTCTCTTGCGAGTGCATTAAGTGTGAATTACTATGATCATACGTGCCCTCAGGTAGAGTCCATTGTTGCTGGTGCTGTACATAAAGCAACCTTGAATGACAAAACTGTCCCTGCTGCTCTGCTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGCCTCTGTTCTATTGAAATCAAAGGGAAAGAATAAAGCAGAAAAGGATGGGCCTGCCAACATTTCTTTGCATGCATTCTATGTTATTGACAATGCTAAGAAAGCAGTGGAAGCCGTTTGCCCCGGGGTTGTATCTTGTGCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTTACTCTATCTGGAGGGCCCACTTGGGATGTACCTAAAGGAAGAAAGGATGGTAGAATATCAAAGGCCAGTGAAACCAGACAGCTGCCAGCTCCCACCTTCAACATCTCCCAACTACAACAAAGCTTCTCTCAAAGAGGCCTTTCCTTGGAAGATCTAGTAGCCCTCTCAGGAGGTCACACCCTCGGGTTTGCTCACTGTTCATCCTTTCAGAACAGAATCCACAAATTCAGCCCCAAACAAGACATTGACCCGTCAATGAACCCATCATTTGCAAACAGCCTCCGAAGCATATGTACCTCTCCAAACAAGGCCAAAAATGCAGGGTCACCATTGGATTCTAGCTCCACCTATTTTGACAATGCTTATTACAAGCTACTACTCGAAGGAAAGAGCATATTCTCTTCTGATCAAGCTCTGCTCACTCATCCCAAAACTAAAGCATTGGTTTCCAAGTTTGCTCATTGCCAAAAGGATTTTGAAAGAGCCTTTGTCGAGTCCATGATCAAGATGAGCAGCATCACTAACGGTGGAAAAGAGATCAGGCTAGATTGTAAACTCGTTAGATGA 948 0.4451 MAAIATVMLMMLSFTSLASALSVNYYDHTCPQVESIVAGAVHKATLNDKTVPAALLRMHFHDCFIRGCDASVLLKSKGKNKAEKDGPANISLHAFYVIDNAKKAVEAVCPGVVSCADILALAARDAVTLSGGPTWDVPKGRKDGRISKASETRQLPAPTFNISQLQQSFSQRGLSLEDLVALSGGHTLGFAHCSSFQNRIHKFSPKQDIDPSMNPSFANSLRSICTSPNKAKNAGSPLDSSSTYFDNAYYKLLLEGKSIFSSDQALLTHPKTKALVSKFAHCQKDFERAFVESMIKMSSITNGGKEIRLDCKLVR* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02576 315 FunFam Peroxidase 24 168 - -
Rops9g02576 315 Gene3D - 24 314 - -
Rops9g02576 315 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601|GO:0042744
Rops9g02576 315 FunFam Peroxidase 156 297 - -
Rops9g02576 315 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 ProSiteProfiles Plant heme peroxidase family profile. 20 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 Pfam Peroxidase 40 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 Gene3D Peroxidase, domain 2 156 297 - -
Rops9g02576 315 PANTHER PEROXIDASE 25-RELATED 12 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Rops9g02576 315 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02576 315 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02576 Rops-Chr9 48211029 48212531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02576 1 315 Peroxidase AT5G42180 69.524 1.83e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02576 K00430 - gmx:100820056 541.191