Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02569 ATGGGACTGGGGTTCTTTAAGGCTTCATTTTGCTGTAACGACTCCCATGATATTCCCATTGTTACTTCAGATTCCTCTCCTGAGCATAGCTACAAACAATCTAGAAAAACCCAACAAATGCCAAGTTCATCATCTTCTCGTCCCAAACCTACACAATCTTCACAAATAGGACCAATTCTAAGGAAACCTTACGTTATGATAAACCAAATATATGAGATGAAAAAAGAACTGGGAAGAGGTCAATCTGGTGTGACTTACCTGTGTGTTGAGAAGACCACAGGGAGAGAGTATGCATGCAAATCAATCCCAAGAGGGAAGCTATTGAATCAGCAAGAGATTGAGGATGTTAGAAGAGAGGTTATGATTTTGCAGCATCTTTCAGGGCAACCCAATATAGTGGAATTCAGGGGTGCTTATGAGGACAGGCAGAACGTGCACCTTGTGATGGAGTTGTGCAGTGGTGGTGAACTCTTTGACCGTATTATTGCCAAAGGGAACTACTCAGAACGTGAAGCAGCTACAATCATGAGGCAGATTGTGAATGTGGTTCACGTGTGCCATTTCATGGGTGTAATGCATAGAGACCTTAAGCCAGAGAATTTCTTGTTGACCACTAAGGATGAGAATGCTGCAGTTAAAGCTACTGATTTTGGACTCTCCATTTTCATTGAGGAAGGTTAG 681 0.4229 MGLGFFKASFCCNDSHDIPIVTSDSSPEHSYKQSRKTQQMPSSSSSRPKPTQSSQIGPILRKPYVMINQIYEMKKELGRGQSGVTYLCVEKTTGREYACKSIPRGKLLNQQEIEDVRREVMILQHLSGQPNIVEFRGAYEDRQNVHLVMELCSGGELFDRIIAKGNYSEREAATIMRQIVNVVHVCHFMGVMHRDLKPENFLLTTKDENAAVKATDFGLSIFIEEG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02569 226 PANTHER SERINE/THREONINE-PROTEIN KINASE 59 222 - -
Rops9g02569 226 Gene3D Transferase(Phosphotransferase) domain 1 157 226 - -
Rops9g02569 226 FunFam Calcium-dependent protein kinase 1 73 156 - -
Rops9g02569 226 SMART serkin_6 71 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02569 226 SUPERFAMILY Protein kinase-like (PK-like) 71 224 IPR011009 -
Rops9g02569 226 MobiDBLite consensus disorder prediction 22 56 - -
Rops9g02569 226 Pfam Protein kinase domain 71 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02569 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Rops9g02569 226 Gene3D Phosphorylase Kinase; domain 1 73 156 - -
Rops9g02569 226 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Rops9g02569 226 ProSiteProfiles Protein kinase domain profile. 71 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02569 Rops-Chr9 48096048 48096728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02569 35 226 EF-hand Containing Proteins AT1G50700 63.819 2.67e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops9g02569 Pkinase 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02569 K13412 - gmx:100816157 351.288