Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02563 ATGGCAACGGCAGTGAAAGTGTACGGACCAGCCATGTCTACGGCTGTGTCAAGAGTCTTGGCCTGTCTCATCGAGAAAGACATCCAATTCCAACTCGTTCCTCTCAACATGTCCAAAGGGGAACATAAGAAACCCGATTTCCTCAAGATCCAGCCCTTTGGCCAAGTACCAGCATTTGAGGATGAGGATATTTCCCTCTTTGAGTCAAGGGCAATATGCCGGTATGTTTGTGAGAAACATTTGGAGAAGGGGAACAGGGAACTGTACGGAACAAACCCTTTAGCAAAGGCTTCTATAGATCAGTGGTTGGAGGCAGAAGGGCAGAGCTTCAACCCACCTTCTTCAACTCTGGTGTTTCAACTGGCATTTGCTCCAAGAATGAAGATCAAGCAGGACGAGGGAGTGATCAAGCAGAACAAAGAAAAGCTTGCAAAAGTGCTTGATGTCTATGATAAGAGGCTTGGTGAGAATCGCTTCTTGGCTGGTGATGATTTCTCTCTAGCTGACCTTTCCCATCTTCCAAACATTCACTATTTGGTCTCTGCGGATGCTGACACTGCTGCACTCTTCACTTCTTCCATGGACAATGTGTCAAGGTGGTGGAATGAGATTTCCACCCGTGACTCATGGAAAAAGGTTGTTGGTTTGCAACGAAGTGCTTGA 663 0.4676 MATAVKVYGPAMSTAVSRVLACLIEKDIQFQLVPLNMSKGEHKKPDFLKIQPFGQVPAFEDEDISLFESRAICRYVCEKHLEKGNRELYGTNPLAKASIDQWLEAEGQSFNPPSSTLVFQLAFAPRMKIKQDEGVIKQNKEKLAKVLDVYDKRLGENRFLAGDDFSLADLSHLPNIHYLVSADADTAALFTSSMDNVSRWWNEISTRDSWKKVVGLQRSA* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02563 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Rops9g02563 220 CDD GST_N_Phi 4 79 - -
Rops9g02563 220 SUPERFAMILY GST C-terminal domain-like 85 215 IPR036282 -
Rops9g02563 220 Gene3D Glutaredoxin 3 87 - -
Rops9g02563 220 FunFam Glutathione S-transferase F2 90 214 - -
Rops9g02563 220 SFLD Glutathione Transferase (cytosolic) 4 216 IPR040079 -
Rops9g02563 220 SFLD Main.5: Phi-like 4 216 - -
Rops9g02563 220 FunFam Glutathione S-transferase F2 4 88 - -
Rops9g02563 220 SUPERFAMILY Thioredoxin-like 5 82 IPR036249 -
Rops9g02563 220 Gene3D - 91 214 - -
Rops9g02563 220 CDD GST_C_Phi 94 214 IPR034347 -
Rops9g02563 220 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 214 - -
Rops9g02563 220 Pfam Glutathione S-transferase, C-terminal domain 116 208 IPR004046 -
Rops9g02563 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Rops9g02563 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 220 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02563 Rops-Chr9 48062027 48063017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02563 7 218 Glutathione S-transferase Gene Family AT2G47730 47.170 4.31e-65 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02563 K00799 - zju:107422694 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02563 9 48062027 48063017 Rops9g02563 9 48062027 48063017 ECH