Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02559 ATGGGTTCTCTCTCTGGCCTCCACCATCCCATTCAATATCCCACTGCTCCCAGAGACGACTCCGTCGTTGACGACTTTCACGGCGTTAAGATTCCCGACCCTTACCGATGGCTTGAGAATCCTGATGCTGAAGAAGTGAAAGAGTTCGTGCAGAAACAGGTTCGGTTAACGGATTCGGTGCTTCAGACATGTGACTGTAGGAACAAACTTGCTGAGAAGATAACGAAGCTGTTTGATCATCCTCGTTATAGTGCTCCTTTCAAGCGAGCTGATAAGTACTTTTACTTTCACAACACGGGCCTTCAGCCACAGAGCGTGCTTTATGTTCAGGATGGTTTGGAGGGTGAAGCAGAGGTTTTGCTTGATCCTAATGCACTCAGTGAAGATGGAACTGTTTCCCTCAACACGTTTTCGGTTAGCAAAGATGCCAAGTTCCTGGCTTATGGACTTAGTTCCAGTGGTAGTGATTGGGTCACTATAAAGGTGATGCATGTTCAGGACAAGAATGTTGAGCCTGATACTTTATCTTGGGTCAAGTTTTCATCTATTAGTTGGACGCATGATAGCAAAGGTTTCTTTTACAGCCGCTATCCTGCACCAAAGGATGGAGAAGTAGTAGATGCTGGGACTGAGACTAATGTGAACCTTCATCATGAGCTCTATTATCATTTTTTGGGTACGGATCAATCACAAGATATTCTGTGCTGGAGACAACCTGAGAATCCTAAATATTTGTTTGAAGCAAGAGTTACTGATGACGGAAAGTATGTTCTTCTCTACATTGAAGAGGGGTGTGATCCAAGTAACAAACTTTACTACTTTGACTTGTCTGAACTTCCTAATGGGCTGGAAGGTTTTCAGAATGAAAATTCCCTCCTCCCCTTTGTCAAGCTTATTGATACATTTGATGCACAGTATATAGCCATAGCAAATGATGACACCCTGTTTACATTTTACACTAATAAAGATGCTCCGAGATACAAACTAGTTCGAGTAGATTTGAAAGAACCAAATGCTTGGAATGATATTATCCAAGAATCTGAAAAAGATGTACTTAAGTCAGCATGTGCTGCAAATGGTAACCAACTGATTGTGAGCTACTTGAGTGATGTCAAATTTGTTCTACAAGTAAGAGACTTAGAAACAGGTTCCTTGCAGCATCAATTACCGATTGACATTGGCACAGTTAATGAAATTTCTGCACGGCGTGAAGATAGTGTGGTTTTCATTGGTTTTACAAGCTTTTTGACTCCCAGTATCATATATCAATGCGACCTGAGAACACAGATTCCTGATATGAAGATATTTCGTGAGATTGTTGTGCCTGGGTTTGATCGCTCAGAGTTTCATGTCAACCAGGTTTTTGTGCCTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCCAGAAAGGATATTATTTTGGATGGTTCACACCCTTGTTTGTTATATGGATATGGTGGTTTTAACATCAGTCTTACACCCTATTTCAGTGTCAACCGCATTGTACTCACAAGACATTTAGGTGGTGTATTCTGCATAGCAAATATTCGTGGTGGTGGAGAATATGGGCAGGAATGGCATAAAGCAGGGTCCCTTGCAAAAAAGCAGAACTGCTTTGATGACTTCATTTCTGCAGCTGAATATCTTGTATCTGCTGGCTATACACAACCCAGAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTATTGGTGCTTGCATAAATCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGACATGCTGCGGTTCCACAAATTCACCATAGGTCATGCTTGGACCTCAGATTTTGGTTGTTCAGAGAAGGAGGAAGAATTTCATTGGCTAATCAAGTACTCACCATTGCACAATGTCCAGAGACCTTGGGAACAGCATCCTGATAAATCAATTCAGTACCCATCAACAATGCTGTTGACGGCTGATCATGATGATCGTGTTGTGCCTTTGCATTCATTGAAGCTATTGGCGACCATGCAGTATGTCCTCGTTACTAGCCTGGATAAAAGTCCTCAAACGAATCCTATAATTGGTCGCATTGAATGCAAGGCTGGACATGGAGCTGGGCGTCCAACACAGAAATTGATTGATGAAGCTGCTGACCGGTATGGTTTTATGGCTAAGATGTTAGACGCCCATTGGATTGAATAG 2196 0.4226 MGSLSGLHHPIQYPTAPRDDSVVDDFHGVKIPDPYRWLENPDAEEVKEFVQKQVRLTDSVLQTCDCRNKLAEKITKLFDHPRYSAPFKRADKYFYFHNTGLQPQSVLYVQDGLEGEAEVLLDPNALSEDGTVSLNTFSVSKDAKFLAYGLSSSGSDWVTIKVMHVQDKNVEPDTLSWVKFSSISWTHDSKGFFYSRYPAPKDGEVVDAGTETNVNLHHELYYHFLGTDQSQDILCWRQPENPKYLFEARVTDDGKYVLLYIEEGCDPSNKLYYFDLSELPNGLEGFQNENSLLPFVKLIDTFDAQYIAIANDDTLFTFYTNKDAPRYKLVRVDLKEPNAWNDIIQESEKDVLKSACAANGNQLIVSYLSDVKFVLQVRDLETGSLQHQLPIDIGTVNEISARREDSVVFIGFTSFLTPSIIYQCDLRTQIPDMKIFREIVVPGFDRSEFHVNQVFVPSKDGTKIPMFIVARKDIILDGSHPCLLYGYGGFNISLTPYFSVNRIVLTRHLGGVFCIANIRGGGEYGQEWHKAGSLAKKQNCFDDFISAAEYLVSAGYTQPRKLCIEGGSNGGLLIGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDFGCSEKEEEFHWLIKYSPLHNVQRPWEQHPDKSIQYPSTMLLTADHDDRVVPLHSLKLLATMQYVLVTSLDKSPQTNPIIGRIECKAGHGAGRPTQKLIDEAADRYGFMAKMLDAHWIE* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02559 731 Gene3D alpha/beta hydrolase 22 721 IPR029058 -
Rops9g02559 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Rops9g02559 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Rops9g02559 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
Rops9g02559 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Rops9g02559 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Rops9g02559 731 PANTHER PROLYL ENDOPEPTIDASE 8 729 - -
Rops9g02559 731 SUPERFAMILY alpha/beta-Hydrolases 451 675 IPR029058 -
Rops9g02559 731 FunFam Prolyl endopeptidase 401 721 - -
Rops9g02559 731 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Rops9g02559 731 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 429 IPR023302 GO:0004252
Rops9g02559 731 Pfam Prolyl oligopeptidase family 496 726 IPR001375 GO:0006508|GO:0008236
Rops9g02559 731 FunFam Prolyl endopeptidase 81 440 - -
Rops9g02559 731 SUPERFAMILY Peptidase/esterase 'gauge' domain 10 429 - -
Rops9g02559 731 Gene3D - 81 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02559 Rops-Chr9 47949748 47954427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02559 K01322 - gmx:100812955 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02559 9 47949748 47954427 Rops9g02559 9 47949748 47954427 ECH
Rops9g02559 9 47949748 47954427 Rops10g02517 10 43951914 43958008 PCT