Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02558 ATGGAGGAGCAGCAGCAGAAGGAAGCGGAGTTGGGGCATGTCGCTGAGAAGACCTTAGAAGACGTTACTCAGTCTTTGCCTTCCGACGCCGTCAAGGAGTTGTTATCCCTCGGTATATGTGTGCGCTGCATCTTTCGTGTGTTCGGTGTCCAAGGTCGCGTCTATGCTTCTCCCTCACTATCACCTTCTCTCTTTGCTGCTTCCACTGTTGAAGATCAACTTTGCCGCCTTTGCTTAGGGATCCTTCAGTTCCGATTCCGTGATGAATCCGGAACGGTGCTTAAAAAGGACGATTTGGCTGTTCTCATTGCTGACATGGTTAAACAACAGGGCTATCAGTCTAACTGCTTTGCCCTTGAAGTTTCCATTCCACCTATTGTCCTTGACAATGATAACTCTCTAAAGTCCTACATGAAAGAGAAATATGGATCTCAACCTTGGTTTCAAGAAAACTCGTTTATTGGATGCGTCTCTACAAAAGATGCCTTGAAATTTTCTCTAGTTTATCCTCTTGAAAATCTTCTGGAATGTGAATCAAGTATTGGTTCTTTCCGCATCCGTTTGACATACACTCACACTAAAGCCTCAAAAGGGGCTGAGAAATGTTCTGATAGTGCTGAGAGTTGCAAGAGAAGAAAAATAGGTGAATCCAATTTAGTTGGAGAAATGCCTCTTAGCATTTTGCTAGAAAATGAATCTTCTGACTGCTGTAGATTCTCGCTAGAAACGGCAAATGAACCTTGCCATTTTACTTACTTTTGCTACAGGACACCCGTCTATTTTGGTGGAAGATACCTGAAGTATTCGCGGAATGTGAGCCAAACCCGCTGGATCATTGATGATGAAAGAATGGGAGAAGCATCAGTTGAGGAAATAATTGGTGGAAACATCCTCCAAGCATGTCAAGCTGACAGTTTTAAGTTTCATGCCGCTGGCAGAGAAGATATCGATGTCCGAATGTTGGGCCCAGGCAGGCCATTTCTTGTTGAGGTGCAAAACGCACGACTTGTCCCATCTGAACTGCTTGTAAGAGAGATAGAGAAAATGATAAACAACATGGAGAATAAATTGGTTAGAGTGAAAAATCTAAAACTCGTTGGTAGTCATGGCTGGGATCTTATGCGTGAAGGCGAAGCAGAGAAGCAGAAGCAATACGCTGCTTTAGTGTGGATTTCTCGTCCTCTGAAGGATGAAGATTTTCAACATGTATCTTCTCTCAAGGATTTGAAAGTTTTGCAGAGGACCCCAATAAGGGTGCTACACCGTCGCAGTCCTTTAGAGCGTGAAAAGATTATTCATTGGATGAAAATAGAGACAATTGCTGGAAGTTCCCAATATTTTCTTTTGCATCTATGTACGCAGGCTGGGACCTACATCAAGGAATTTGTTCATGGGGATCTTGGACGCACGCATCCCAGCATTGGATCAATTTTGGGTTGTAGAGCTGAAATTTTGCAACTTGACTTCTTTGATGAAAGACATACAGCCAAGCCTTTTCCTTCGGTCCCCTTTTCGCAACTATTTTGTGGGAGCATTTCAGCTTCCCTGATCAAGTTCCTGGTGGTCGACTCACAAAGGACAACCATAAGCTATCGTTCCAAAGGAGCTAGTTTGCAGACTCTGGGTCATGTTTTAGGTTTAGTTCCGGACACTTTCTCATTGAACCGCGGATGA 1674 0.4373 MEEQQQKEAELGHVAEKTLEDVTQSLPSDAVKELLSLGICVRCIFRVFGVQGRVYASPSLSPSLFAASTVEDQLCRLCLGILQFRFRDESGTVLKKDDLAVLIADMVKQQGYQSNCFALEVSIPPIVLDNDNSLKSYMKEKYGSQPWFQENSFIGCVSTKDALKFSLVYPLENLLECESSIGSFRIRLTYTHTKASKGAEKCSDSAESCKRRKIGESNLVGEMPLSILLENESSDCCRFSLETANEPCHFTYFCYRTPVYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQADSFKFHAAGREDIDVRMLGPGRPFLVEVQNARLVPSELLVREIEKMINNMENKLVRVKNLKLVGSHGWDLMREGEAEKQKQYAALVWISRPLKDEDFQHVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKIETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDFFDERHTAKPFPSVPFSQLFCGSISASLIKFLVVDSQRTTISYRSKGASLQTLGHVLGLVPDTFSLNRG* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02558 557 FunFam tRNA pseudouridine synthase Pus10 258 382 - -
Rops9g02558 557 FunFam tRNA pseudouridine synthase Pus10 383 491 - -
Rops9g02558 557 Coils Coil 343 363 - -
Rops9g02558 557 SUPERFAMILY Pseudouridine synthase 379 489 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Rops9g02558 557 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 257 489 - -
Rops9g02558 557 Gene3D - 258 382 - -
Rops9g02558 557 Gene3D - 383 491 - -
Rops9g02558 557 PANTHER UNCHARACTERIZED 69 489 IPR039894 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02558 K07583 - gmx:100780683 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02558 9 47942707 47949630 Rops9g02558 9 47942707 47949630 ECH