Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02542 ATGGAAATTGAAATAATCTCCGCTCAGTGCATCAAACCTTCTTCCCCAACGCAAAAACACTTGAAAACTCACAAGCTCTCTCTTTTAGACCAGTTTGTGCCTCATTTTTATGTACCCGTGGTACTTTTCTACTCTGCAGATCAGAGCACTGAAGCCAATAGTGATAGTGATATCACACAGCGAAGACTGAAACAGTTAAAGGAATCTTTATCAGATGTTTTGACTCGTTTTTACCCGTTTGCTGGAAGGATTAATGACCACAAGCTTTCCATAGATTGCAATGATGAAGGGGTTTACTACGTCGAGGCCAAAGCAAGCTATAGTCTTGTTGACTTTTTTAGCCAATCTAATTTCTCATCGTTCATCCATAAATTTCTTCCAGGTCAACCTTCTTTGGAAGAAACAACTGAAGGATATGTGGCTAAGAGTTGGGGTTCTACCTCTCACAGGGAATTTCTATATGCATTTCCTAACTTTGACGCTGCTTCAACTTTCCCTCAGAATGATACTTGCCCAAACGTGATGGCTTTTTGCGGCCAATTCCTGAAGAAAGGTAGGCTTGGTACGAGGAGATTTTTGTTTGATGCAGAAGCTATTTCTAAGCTGAAGGCCCAAGGGTCTAGTTTAACAGTGCCAAATCCTACACGAGTGGAGGTTGTAACATCCCTTATATGCAAATGTGCCACAGCAGCATTCAAGGCAAATTCTGGTTTGGAGACGCCTACTATGGTGAGTCATGCAGTAAATATGCGACGAAGGGCTTCTCCTACTTTTCCAGAATCTTGTATGGGTAATTTTCTTTGGTTGTCTACCGCCCTAATGAGCTCAGAGGATAAGATGGTTGAGACAGCATCGAGTGTTGCCCGGGCAAATGGGGTGAACTATATTCTTTTTTCAAGTTGGTGTAATTTCGGTCTTTATGATGTTGATTATGGATGGGGAAAACCAACTTGGGTGTCTTGCACTACTACTTCACCTGATGTTGACACTCCGTTTTTTAACTCCGTCCTCCTAATTGATACACCATCAGGTGCTGGAATAGAGGCTTGGATTTATTTCAATGAAGACGATCTGACCATATTGCAACAAGACAAGGAGCTCCTTGCTTTTGCCACCTTTGATCCAAATCCTTTACATATTATCAATTATGTATCTAATGCATAA 1164 0.4141 MEIEIISAQCIKPSSPTQKHLKTHKLSLLDQFVPHFYVPVVLFYSADQSTEANSDSDITQRRLKQLKESLSDVLTRFYPFAGRINDHKLSIDCNDEGVYYVEAKASYSLVDFFSQSNFSSFIHKFLPGQPSLEETTEGYVAKSWGSTSHREFLYAFPNFDAASTFPQNDTCPNVMAFCGQFLKKGRLGTRRFLFDAEAISKLKAQGSSLTVPNPTRVEVVTSLICKCATAAFKANSGLETPTMVSHAVNMRRRASPTFPESCMGNFLWLSTALMSSEDKMVETASSVARANGVNYILFSSWCNFGLYDVDYGWGKPTWVSCTTTSPDVDTPFFNSVLLIDTPSGAGIEAWIYFNEDDLTILQQDKELLAFATFDPNPLHIINYVSNA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02542 387 Gene3D - 182 373 IPR023213 -
Rops9g02542 387 PANTHER F21J9.9 140 372 - -
Rops9g02542 387 Gene3D - 1 141 IPR023213 -
Rops9g02542 387 Pfam Transferase family 1 130 - -
Rops9g02542 387 Pfam Transferase family 187 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02542 Rops-Chr9 47684764 47686148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02542 1 112 Monolignol Biosynthesis Gene Families AT5G48930 33.043 7.67e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02542 - - aprc:113870852 476.092