Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02539 ATGGTGGAGAAGTTCCTGACCGTGCCGCCATTTGAGTGCGCATGGCGAGAGGATTTGAAATTCCGGGAAGCAGGTAGGGGTTGTGTGGCTTTTGAAGCATTCGCCTGCAATGATGTCACGCTGGTTTTCAGGGAGAATGTGGGAAGCCAGGGGTACCACTATAAAAGAGATAGCAGTCCTCACTACACAATCATATTGGGGAGTCATAGGAATCGAAGACTCAGAATTGAGGTCAATGGAAAAACTGTTGTTGACGTGGCAGGGGTTGGACTTTGCTGCTCTACCTCCTTTCGGAGTTATTGGATCAGTATCTATGATGGTATGATCAGCATAGGTAATGGGAAATACCCTTTTCAGGATGTTGTCTTCCAGTGGTCAGATTCTCATCCCAATTGTAATGTTCAGTATATTGGCCTCAGTAGCTGGGATAAACATGTTAGGTATAGAAATGTTAATGTTTTGTCATTGACACACACACATATGCCCTTATCCAAGCATGTTGTTTTTGGTGATTATCAAGTTGAGGATGAGGTTGATGCAGACAAACCAATGGATTATGATAAATGGGGCCTCAAAAATTTTCTCGAGAGTTGGGACTTGTCTGACATGTTATTCATCATTGGTGTTGAGGAAAGACCTGTTCCTGCTCACAAGGCAATTTTAGCTGCTTCTGGAAACTTCTCTTTGTGCTCCTCCTCCTTTGTCATCACACTACCCACAGTGTCTTATGCGCTTCTCCATGCCCTGCTTCACTACATCTACACTGGCTGGACCCAGATTCCACAGGAACAACTTGGTTCTTTGAGGGATTTAAGTCTACAGTTTGAAGTGATGCCACTGGTGAAGCAATGTGAAGAGATCATGGAACGGTTTAAGCTAGACAAGAAGTTGTTTGACACTGGCAAGAATGTGGAGTTAACATATCCATGTATCCGACCTCATTGTTCAACTTTGCCCTCACTTCCTGTCAGCATTCAGAAACTGAGACAATTGAAATTAACAGGCCAGTACAGTGATATAAACATCTACATTGAGAATTATGGGCTTGTTGCACGAGCACATAAAATTGTTCTCAGCTTATGGAGTATCCCCTTTGCCAAGATGTTCACAAATGGAATGAGTGAAAGCATGTCCTCGGAGGTTACTTTACGGGATGTGCCACCTGAAGCTTTCAAGGCTATGTTTGACTTTTTATATGAAGGGCAATTGAATGAGAAAATTGTAGATTCCGGTTCTTTGTTGCTCCAACTCCTTCTATTGGCTGATCAATTTGGAGTGACTTTTCTTCACCAAGAATGCTGCAAAATGCTTTTAGAATGCCTCTCAGAGGACTCAGTATGTCCACTCCTCCAAGTGGTTTCTTCAATCCCATCATGTAGACTTATTAAAAAAAAACTGCAGAGGAGAATTGCCATGAACTTTGACTATTGTATCAGTGCAAGTACCGACTTCGCTTTGTTAGATGGGACAACTTTCATCAATATCATTAAGCATCCAGATTTGACGGTAACATCTGAAGAGAAAGTTCTTAATGCAATCCTAATGTTTGGCATGAATGCAAAAGAAATGTTTGGATGGGAAATGGTGGATCAGTTAATAATAAGTTCAACACCTGAACTCCTTTTTGGTGAGAGGCTTCAGTTAGTTTATGACTTGTTGCCATTTGTGCGATTTCCACTACTTCAGTATTCCTTACTTGATAAGTTGCAGAATAGCAACATTGCCTGGCATATTCCCATTCTCCAAAATCTCGTTAACGAGGCTATCAATTTTGTTAAATATGGGTTGGGAAAGCCAGAAAATGAAAATGTTAGATTCCAACATAGACGGTCTAGTTACAGGGAGCTCCAGTACATTTGTGATGGGGACGACCATGGAGTTCTGTACTTTGCAGGCACATCCTATGGTGAACACCAGTGGGTTAATCCACTTTTGGCAGAGCCAAAGAAAATTACCATTACAGCCAGCAGTCCCCACTCAAGATACACTGATCCCAAGGTTTTGGTCTCAAGAAGCTTCCAGGGAACATGTTTTGCTGGGCCTCGATTGGAAAATGGACATAACAGTACCTGGTGGATGGTTGATCTTGGCCAAGATCATCAGCTTATGTGCAACTACTATACCCTGAGGCAGGATGGTTCCAAGGCCTTTCCGAGATGTTGGAATATTCAGGGCTCACTGGAGGGGAAGAACTGGACGAACTTGAGAGTCCATGAGAATGATAGAACAATATGCAAACCTGATCAGAGCAATGAAGCCAATAGGGATAGTGATATCAAACAGCGAAGACTGAAACAGTTAAGGAAATGTTTATCAGATGTTTTGACTCGCTTTTACCCGTTTGCTGGAAGGATTAATGACCACAAGCTTTCCATAGATTGCAATGATGAAGGGGTTTACTACGTCGAGGCCAAAGCAAGCTATAGTCTTGTTGACTTTTTTAGCCAATCTAATATCTCATCATTCATCCATAAATTTCTTTCGGGTCAACCATATTTGGCAGAAACAACCGAAGAATATGTGGCTAAGAATGATACTTGCCTAAACGCGATGGCTTTTTGCGGCCAATTCTTGAAGACAGGTAGGTTAGGTAAGAAGAGATTTTTGTTTGATGCAGAAGCTATTTCTAAGCTGAAGGCCCAAGGGTCTAGTTTAACAGTGCCAAATCCTACACGAGTGGAGGTTGTAACATCTCTTATAAGTTATATGCAAATGTGCCACAACAACATTCAAGGCAAATTATGGTTTGGAGAGGCCTACTATAGTGGGTCATGCAGTAAATATGCGACGAAGGGCATCACCTACTTTTCCAGAATCCTATATGGGTAA 2829 0.4203 MVEKFLTVPPFECAWREDLKFREAGRGCVAFEAFACNDVTLVFRENVGSQGYHYKRDSSPHYTIILGSHRNRRLRIEVNGKTVVDVAGVGLCCSTSFRSYWISIYDGMISIGNGKYPFQDVVFQWSDSHPNCNVQYIGLSSWDKHVRYRNVNVLSLTHTHMPLSKHVVFGDYQVEDEVDADKPMDYDKWGLKNFLESWDLSDMLFIIGVEERPVPAHKAILAASGNFSLCSSSFVITLPTVSYALLHALLHYIYTGWTQIPQEQLGSLRDLSLQFEVMPLVKQCEEIMERFKLDKKLFDTGKNVELTYPCIRPHCSTLPSLPVSIQKLRQLKLTGQYSDINIYIENYGLVARAHKIVLSLWSIPFAKMFTNGMSESMSSEVTLRDVPPEAFKAMFDFLYEGQLNEKIVDSGSLLLQLLLLADQFGVTFLHQECCKMLLECLSEDSVCPLLQVVSSIPSCRLIKKKLQRRIAMNFDYCISASTDFALLDGTTFINIIKHPDLTVTSEEKVLNAILMFGMNAKEMFGWEMVDQLIISSTPELLFGERLQLVYDLLPFVRFPLLQYSLLDKLQNSNIAWHIPILQNLVNEAINFVKYGLGKPENENVRFQHRRSSYRELQYICDGDDHGVLYFAGTSYGEHQWVNPLLAEPKKITITASSPHSRYTDPKVLVSRSFQGTCFAGPRLENGHNSTWWMVDLGQDHQLMCNYYTLRQDGSKAFPRCWNIQGSLEGKNWTNLRVHENDRTICKPDQSNEANRDSDIKQRRLKQLRKCLSDVLTRFYPFAGRINDHKLSIDCNDEGVYYVEAKASYSLVDFFSQSNISSFIHKFLSGQPYLAETTEEYVAKNDTCLNAMAFCGQFLKTGRLGKKRFLFDAEAISKLKAQGSSLTVPNPTRVEVVTSLISYMQMCHNNIQGKLWFGEAYYSGSCSKYATKGITYFSRILYG* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02539 942 CDD BTB_POZ_ZBTB_KLHL-like 200 275 - -
Rops9g02539 942 SUPERFAMILY Galactose-binding domain-like 651 736 IPR008979 -
Rops9g02539 942 Pfam BTB And C-terminal Kelch 453 516 IPR011705 -
Rops9g02539 942 Gene3D - 744 857 IPR023213 -
Rops9g02539 942 Pfam Farnesoic acid 0-methyl transferase 50 146 IPR022041 -
Rops9g02539 942 Pfam BTB/POZ domain 329 439 IPR000210 GO:0005515
Rops9g02539 942 Pfam BTB/POZ domain 191 290 IPR000210 GO:0005515
Rops9g02539 942 Gene3D Potassium Channel Kv1.1; Chain A 320 469 IPR011333 -
Rops9g02539 942 ProSiteProfiles BTB domain profile. 201 262 IPR000210 GO:0005515
Rops9g02539 942 Pfam F5/8 type C domain 653 761 IPR000421 -
Rops9g02539 942 Gene3D Potassium Channel Kv1.1; Chain A 189 303 IPR011333 -
Rops9g02539 942 SMART BACK_2 447 570 IPR011705 -
Rops9g02539 942 SMART BTB_4 201 292 IPR000210 GO:0005515
Rops9g02539 942 SMART BTB_4 338 441 IPR000210 GO:0005515
Rops9g02539 942 SUPERFAMILY POZ domain 190 289 IPR011333 -
Rops9g02539 942 ProSiteProfiles BTB domain profile. 338 407 IPR000210 GO:0005515
Rops9g02539 942 CDD BTB_POZ_ZBTB_KLHL-like 337 404 - -
Rops9g02539 942 Pfam Transferase family 764 828 - -
Rops9g02539 942 PANTHER OS05G0345500 PROTEIN 3 749 - -
Rops9g02539 942 SUPERFAMILY POZ domain 325 438 IPR011333 -
Rops9g02539 942 Gene3D - 470 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02539 Rops-Chr9 47618240 47629822 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02539 - - gmx:100810794 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02539 9 47618240 47629822 Rops9g02539 9 47618240 47629822 ECH