Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02536 ATGACAGAAGAAGGAGAGAGCAATGAAGTAGTGAAGGGAAGAGAGGCAATACCCCTGCTCACCCCATACAAGATGGGAAACTTTAATCTATCCCACAGGATAGTGTTGGCACCGTTAACACGATCAAGGTCTTATAACTTTGTTCCTCAGCCTCATGCTGCTCTATATTATTCTCAAAGAACAACCAAGGCTGGCTTCTTGATCGGGGAAGCATCTGGGGTGTCTGACACAGCACATGGGTACCCAAATACACCTGGCATTTGGACAAGGGAACAAGTGGAGGCGTGGAAACCAATTGTGAGCGAAGTTCATTCAAAAGGGGGCATATTCTTCTGTCAACTTTGGCATGCGGGAAGAGTCTCCAGATACGGATACCAGCCGGAAGGTAAACCCCCAATATCATGCACAAACAAGCCCATTCGGAAAGATATCTTCAACAATGTTGCAACTGACAAATACCCACCTCCTCGCCGTCTGAGAACTGATGAAATCCCCATGCTTGTCAATGACTTCAGAATTGCAGCAAAAAATGCAATGGAAGCCGGTTTTGATGGAGTAGAGATACACGGAGCGAACGGGTACTTGCTAGATCAGTTCCTAAAGGACAAAGTGAACGACAGAGATGACGAGTATGGAGGTAACTTAGAGAATCGTTGCCGCTTCCCACTACAAGTGGTGAAGGCAGTAGCTGATGAGATAGGAGCTGACAAGGTTGGTATCAGGCTTTCCCCTTTCGCTGATTATAATGATTGTGGAGATTCTGATCCTCAAGCATTGGGTATTCACATGGCTCAATCACTAAATCAAATGGGCATTCTCTATTGTCATATGATTGAGCCTAGGATGATCACCCAATTCCATAAGTTAGACACCAAATGGTCCCTAATGCCAATTAGAAAGGTCTTCAATGGGACCTTTATTGTTGCTGGTGGTTACGATAAGAGTGAGGGAAACCGAGTTATAGCTTGTGGTGTTACCGATTTGGTGGCTTATGGACGCCTATATTTGGCTAATCCAGATCTCCCTTTAAGGTTTGAGCTCGATGCTGAGTTAAACGATCCTGATACCAGCACCTTTTATACACATGACCCCGTGCTTGGATATACTGATTATCCATTTCTACAAAATGCTACTATATAG 1140 0.4465 MTEEGESNEVVKGREAIPLLTPYKMGNFNLSHRIVLAPLTRSRSYNFVPQPHAALYYSQRTTKAGFLIGEASGVSDTAHGYPNTPGIWTREQVEAWKPIVSEVHSKGGIFFCQLWHAGRVSRYGYQPEGKPPISCTNKPIRKDIFNNVATDKYPPPRRLRTDEIPMLVNDFRIAAKNAMEAGFDGVEIHGANGYLLDQFLKDKVNDRDDEYGGNLENRCRFPLQVVKAVADEIGADKVGIRLSPFADYNDCGDSDPQALGIHMAQSLNQMGILYCHMIEPRMITQFHKLDTKWSLMPIRKVFNGTFIVAGGYDKSEGNRVIACGVTDLVAYGRLYLANPDLPLRFELDAELNDPDTSTFYTHDPVLGYTDYPFLQNATI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02536 379 FunFam 12-oxophytodienoate reductase 3 12 378 - -
Rops9g02536 379 Gene3D Aldolase class I 8 378 IPR013785 -
Rops9g02536 379 Pfam NADH:flavin oxidoreductase / NADH oxidase family 19 348 IPR001155 GO:0010181|GO:0016491
Rops9g02536 379 SUPERFAMILY FMN-linked oxidoreductases 18 374 - -
Rops9g02536 379 CDD OYE_like_FMN 18 355 - -
Rops9g02536 379 PANTHER NADH OXIDOREDUCTASE-RELATED 16 374 IPR045247 GO:0010181|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02536 Rops-Chr9 47595738 47603692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02536 11 376 Acyl Lipid Metabolism Gene Families AT1G76690 66.757 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02536 K05894 - gmx:100810271 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02536 9 47595738 47603692 Rops9g02536 9 47595738 47603692 ECH