Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02525 ATGGAGAAAACAGGAGTATTATCAGCGAAAGAGGCATTCGAGAAGTTAGAGAAGGTTGGAGAAGGGACATATGGGAAGGTTTACAGGGCAAGAGAGAAAGCTACTGGGAAGATCGTTGCCCTCAAGAAAACTCGTCTCCACGAAGATGAAGAAGGTGTCCCTCCCACCACTCTTCGTGAGGTTTCCATTTTGCGAATGCTCTCTCGCGATCCCCATGTCGTCAGGTTAATGGATGTGAAACAAGGTCAGAACAAGGAAGGGAAGACAGTGCTTTACTTGGTCTTTGAGTACATGGAAACCGATCTCAAGAAATTCATTCGGAGTTTCCGTCAAACTGGAGAAAACATCCCACCCAAAACCATCAAAAGCTTGATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCACGGCCATGGAATCTTGCATAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGAAAAACAATGATGCTTAAGATAGCTGATCTTGGACTTGCTCGAGCATTTACTGTGCCGATTAAGAAGTACACGCACGAGATACTAACCCTTTGGTATAGAGCTCCTGAAGTCCTGTTGGGAGCTACCCATTATTCAATGGCAGTGGATATGTGGTCAGTTGGCTGCATATTTGCTGAACTTGTCACCAAGCAAGCACTCTTTCCTGGTGATTCTGAGCTGCAACAACTCCTTCATATATTCAGGCTGTTGGGCACTCCTAATGAAGAGGTGTGGCCAGGAGTTAGTAAACTAATGAATTGGCATGAGTACCCCCAGTGGAATCCTCAGAGTCTCAAAACCGCTGTTCCAAATTTGGATGAGCCTGGACTGGATCTGCTATCTCAAATGTTGCAATATGAACCTTCGAGGCGGCTTTCTGCAAAGAAAGCTATGGAACACTATTACTTCGATGACCTGGACAAGAGATATCTTTAG 936 0.4551 MEKTGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMETDLKKFIRSFRQTGENIPPKTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWNPQSLKTAVPNLDEPGLDLLSQMLQYEPSRRLSAKKAMEHYYFDDLDKRYL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02525 311 FunFam Cyclin-dependent kinase B2,2 9 99 - -
Rops9g02525 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Rops9g02525 311 SMART serkin_6 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02525 311 Pfam Protein kinase domain 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02525 311 ProSiteProfiles Protein kinase domain profile. 13 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02525 311 SUPERFAMILY Protein kinase-like (PK-like) 11 307 IPR011009 -
Rops9g02525 311 Gene3D Transferase(Phosphotransferase) domain 1 101 310 - -
Rops9g02525 311 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Rops9g02525 311 Gene3D Phosphorylase Kinase; domain 1 8 99 - -
Rops9g02525 311 PANTHER CELL DIVISION PROTEIN KINASE 11 304 - -
Rops9g02525 311 FunFam Cyclin-dependent kinase 2 101 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02525 Rops-Chr9 47508984 47510884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02525 1 311 Core Cell Cycle Gene Families AT1G20930 85.397 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Rops9g02525 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02525 K07760 - gmx:100808302 607.831