Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02524 ATGGTTTCGCTTCATCCGCCAGTGTGTCCTTTCTCAGTTTCCTCTTCTTCTTCCTCTTTTATGAGCGGCTCTCTTCAGTTTCGCTCTTCACTCTCTGCGAAAAGCAGCTTCATAACAAAACAACATCCTTCTTTCTTCTGCAATGCTTCATGGCAAGAGCTTGCGGGAGTTTTACTATTCTCCTCGATCCCTTTCACTGCCGTTAAAGCTATAGCTAATAGTCCGCTAGGGGAGTCCCTTCAGAGGAAAATGGAGGAGAGAAAGAAATTTGCTTTAGAAAACTCGTCCAAATTCAAGGCCTCTGCCGAGAAGGCCAGAAAGGAGAGCTGTTGGTATGGAGAAGATCGGCCTCGTTGGCTTGGTCCTATTTCATATGGCTACCCATCATATCTTACTGGGGAACTGCCTGGGGATTATGGCTTTGACATTGCTGGGCTTGGCAAGGATCCTGTGGCACTGCAGAAATACTTCAACTTTGAGATATTGCATGCTCGGTGGGCTATGCTTGCATCTGTTGGTGCTCTAATTCCTGAATTATTAGACCTACTGGGAGCCTTTCACTTTGTAGAACCTGTTTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTAGATTACCTTGGCATCCAAGGTCTTCACTTAGCTGGAAGCCAGGGAGTGGTTGTGATTGCTATTTGCCAAGCACTCCTTATGGTTGGACCGGAATACGCTAGATATTGTGGGATTGAGGCATTGGAGCCTCTGGGAATATATCTACCTGGTGATATAAATTATCCTGGAGGAGCATTGTTTGATCCCTTAAATCTGTCCAAAGATCCTGAAGCTTTTGAAGAGCTGAAGGTGAAAGAAATTAAAAATGGACGCTTAGCGATGATTGCCTGGTTAGGCTTTTACATGCAAGCAGCTCTGACTGGTAAAGGTCCTGTGCAGAACCTTCTGGATCACATCTCCGATCCTTTCCACAACAACTTGCTGGGCTCACTCAACTTCATGAAAGTAATCGAGTATTATTAG 1020 0.4529 MVSLHPPVCPFSVSSSSSSFMSGSLQFRSSLSAKSSFITKQHPSFFCNASWQELAGVLLFSSIPFTAVKAIANSPLGESLQRKMEERKKFALENSSKFKASAEKARKESCWYGEDRPRWLGPISYGYPSYLTGELPGDYGFDIAGLGKDPVALQKYFNFEILHARWAMLASVGALIPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMIAWLGFYMQAALTGKGPVQNLLDHISDPFHNNLLGSLNFMKVIEYY* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02524 339 Pfam Chlorophyll A-B binding protein 128 303 IPR022796 -
Rops9g02524 339 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 72 327 IPR001344 GO:0009765|GO:0016020
Rops9g02524 339 SUPERFAMILY Chlorophyll a-b binding protein 109 328 - -
Rops9g02524 339 FunFam Chlorophyll a-b binding protein, chloroplastic 118 330 - -
Rops9g02524 339 Gene3D Chlorophyll a/b binding protein domain 118 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02524 Rops-Chr9 47496003 47504894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02524 28 331 Chloroplast and Mitochondria Gene Families AT1G76570 75.329 4.21e-176 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02524 K14172 - gmx:100786260 570.466