Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g02515 | ATGGGTCTCAAAACCGGTGTTAGTGGCTCTATCACAAATCCAGAAATGGATAAGCAGGTGATTTTCCTACCCCTCTTCATGTCCTTCTTCATAATTTTCATAGCTGGTGCTGCATCTTCATCATGTCCCATGGATCTCAGCTATGTTGAGACCTTTCCTTGGGACACTTCAACATGCAGAGATCCAATTGATTCACAACACTGTTGCCAAGCTTTGCTTAGTCTCTTTGGCATAGGACTTGCCCAACACCTCAAAGCAACTTCCCTTTTTCAACTTCCTGATGAAAACACTTCCTCCTCTTGCTTATCTGATTTCAAACTCAAGCTTTCAGCCTTGTCAATCAAACCATCTTTGGTCCCTTCTTGTTTCCGTAACTCTACACAGTTTGTTACCAACTCTTCAAATTGTGCAGGTATTCATACCATCCAAGATTGGAAGCAAAAGGTAGGGATGATGAGCCCATTAGACACTTCTTGCAATGGTGACATGAGTTCTCAAACTAAATGTAGCATTTGCACTGATGCTGGCCTTAAAGTGGCTTCCCAGCTTACTAGTATTGACCCAAATGCCACAAAATGTTTTTATTTTGCAATATTATATGCTGCAGCAATTGTTAATCAGTTAGGTCCAACAGATGTAGGCACAGCTGGTTGCATACTAGGCATGCCAATATCTACAAAAGGGTCATCAAATAGAGAAAAGGTGTTGAAATTGGTTTTTGGGTTTTTGGGTGCTGTTATTGGTGTTCTCCTTGCTTTTGTTCTTATAATCATGTACAGGAAGTGGGATAAGAGAAGGAAGGAAGATATTTATCACAGGAGAATTGAAAACAGTGTCAGGGAGAGTGTTTTGCCTAATACTGGGGCAAAATGGTTTCATATATCAGAGCTTGAAAAAGCCACAAATAAGTTTTCACAGAGAAATATGATTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGATGGAACTTTGGCGGCAGTAAAGGAAATTTTTGATTTGGATACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATTATAAGCAAAATAAAGCACAGGAATCTTCTTGCTTTAAGGGGTTGTTGTGTTACAAGTGATAATTTGAAAGGGAAGAGGAGGTTCCTAGTTTATGACTTCATGCCTAATGGTAGCCTCAGTTACCAATTGTCTATTGCTGGGGCTAATAGGCTAACATGGCCACAAAGAAAGAACATAATCCTTGATGTGGCTAAAGGGCTTGCTTATTTGCACTATGAAATCAAACCCCCAATTTATCACCGTGACATTAAAGCTACCAACATACTTTTGGATTCAAAACTGAAAGCCAAAGTATCAGATTTTGGCTTGGCCAAGCAAGGTAATGAAGGGCAATCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCACTATATGGGCAACTAACAGAGAAAAGTGATGTCTATAGTTTTGGAATTGTGATCCTTGAAATCATGAGTGGAAGAAAAGTGCTTGATACCATGAATTCATCTGTGGTTCTAATCACTGATTGGGCATGGACACTTGCAAAATCAGGACAGGTGGAGGAAATCTTTGATCAGTCAATAAGAAATGAAGGGCCAGAGAAAATCATGGAAAGGTTTGTTCTTGTTGGAATTCTTTGTGGTCATGCAATGGTAGCTTTAAGGCCTACTATTGCAGAGGCGCTCAAGATGTTAGAGGGTGACATTGACATTCCCAATTTACCAGATAGGCCAGTACCACTTGGTCATGAGTCATATCAATCTTCTCTGTTGCTTGGTTTGCAAAGAAGTGGAAGATCAACACCATTTATTTCATCTTATGCAACAAGTAGTATGAGCACAATATAG | 1884 | 0.4023 | MGLKTGVSGSITNPEMDKQVIFLPLFMSFFIIFIAGAASSSCPMDLSYVETFPWDTSTCRDPIDSQHCCQALLSLFGIGLAQHLKATSLFQLPDENTSSSCLSDFKLKLSALSIKPSLVPSCFRNSTQFVTNSSNCAGIHTIQDWKQKVGMMSPLDTSCNGDMSSQTKCSICTDAGLKVASQLTSIDPNATKCFYFAILYAAAIVNQLGPTDVGTAGCILGMPISTKGSSNREKVLKLVFGFLGAVIGVLLAFVLIIMYRKWDKRRKEDIYHRRIENSVRESVLPNTGAKWFHISELEKATNKFSQRNMIGQGGDGVVYKGTLSDGTLAAVKEIFDLDTKGDEEFCYEVEIISKIKHRNLLALRGCCVTSDNLKGKRRFLVYDFMPNGSLSYQLSIAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKLKAKVSDFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTMNSSVVLITDWAWTLAKSGQVEEIFDQSIRNEGPEKIMERFVLVGILCGHAMVALRPTIAEALKMLEGDIDIPNLPDRPVPLGHESYQSSLLLGLQRSGRSTPFISSYATSSMSTI* | 628 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g02515 | 627 | SUPERFAMILY | Protein kinase-like (PK-like) | 289 | 594 | IPR011009 | - | |
Rops9g02515 | 627 | Gene3D | Phosphorylase Kinase; domain 1 | 265 | 384 | - | - | |
Rops9g02515 | 627 | FunFam | probable LRR receptor-like serine/threonine-protein kinase RKF3 | 385 | 585 | - | - | |
Rops9g02515 | 627 | FunFam | Receptor-like serine/threonine-protein kinase At4g25390 | 269 | 384 | - | - | |
Rops9g02515 | 627 | PANTHER | OS01G0750732 PROTEIN | 58 | 585 | - | - | |
Rops9g02515 | 627 | SMART | serkin_6 | 304 | 577 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g02515 | 627 | Gene3D | Transferase(Phosphotransferase) domain 1 | 385 | 583 | - | - | |
Rops9g02515 | 627 | Pfam | Protein kinase domain | 306 | 516 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g02515 | 627 | CDD | STKc_IRAK | 310 | 579 | - | - | |
Rops9g02515 | 627 | ProSiteProfiles | Protein kinase domain profile. | 304 | 564 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g02515 | 627 | Pfam | SPARK | 38 | 193 | IPR043891 | - | |
Rops9g02515 | 627 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 429 | 441 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g02515 | Rops-Chr9 | 47249086 | 47250969 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g02515 | 34 | 599 | Receptor kinase-like Gene Family | AT1G11050 | 52.218 | 0.0 | 584 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RKF3 | Rops9g02515 | Pkinase | 5.9e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g02515 | - | - | gmx:100820563 | 1015.76 |