Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02515 ATGGGTCTCAAAACCGGTGTTAGTGGCTCTATCACAAATCCAGAAATGGATAAGCAGGTGATTTTCCTACCCCTCTTCATGTCCTTCTTCATAATTTTCATAGCTGGTGCTGCATCTTCATCATGTCCCATGGATCTCAGCTATGTTGAGACCTTTCCTTGGGACACTTCAACATGCAGAGATCCAATTGATTCACAACACTGTTGCCAAGCTTTGCTTAGTCTCTTTGGCATAGGACTTGCCCAACACCTCAAAGCAACTTCCCTTTTTCAACTTCCTGATGAAAACACTTCCTCCTCTTGCTTATCTGATTTCAAACTCAAGCTTTCAGCCTTGTCAATCAAACCATCTTTGGTCCCTTCTTGTTTCCGTAACTCTACACAGTTTGTTACCAACTCTTCAAATTGTGCAGGTATTCATACCATCCAAGATTGGAAGCAAAAGGTAGGGATGATGAGCCCATTAGACACTTCTTGCAATGGTGACATGAGTTCTCAAACTAAATGTAGCATTTGCACTGATGCTGGCCTTAAAGTGGCTTCCCAGCTTACTAGTATTGACCCAAATGCCACAAAATGTTTTTATTTTGCAATATTATATGCTGCAGCAATTGTTAATCAGTTAGGTCCAACAGATGTAGGCACAGCTGGTTGCATACTAGGCATGCCAATATCTACAAAAGGGTCATCAAATAGAGAAAAGGTGTTGAAATTGGTTTTTGGGTTTTTGGGTGCTGTTATTGGTGTTCTCCTTGCTTTTGTTCTTATAATCATGTACAGGAAGTGGGATAAGAGAAGGAAGGAAGATATTTATCACAGGAGAATTGAAAACAGTGTCAGGGAGAGTGTTTTGCCTAATACTGGGGCAAAATGGTTTCATATATCAGAGCTTGAAAAAGCCACAAATAAGTTTTCACAGAGAAATATGATTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGACTCTTTCAGATGGAACTTTGGCGGCAGTAAAGGAAATTTTTGATTTGGATACTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGAGATTATAAGCAAAATAAAGCACAGGAATCTTCTTGCTTTAAGGGGTTGTTGTGTTACAAGTGATAATTTGAAAGGGAAGAGGAGGTTCCTAGTTTATGACTTCATGCCTAATGGTAGCCTCAGTTACCAATTGTCTATTGCTGGGGCTAATAGGCTAACATGGCCACAAAGAAAGAACATAATCCTTGATGTGGCTAAAGGGCTTGCTTATTTGCACTATGAAATCAAACCCCCAATTTATCACCGTGACATTAAAGCTACCAACATACTTTTGGATTCAAAACTGAAAGCCAAAGTATCAGATTTTGGCTTGGCCAAGCAAGGTAATGAAGGGCAATCTCATCTCACCACAAGGGTTGCTGGCACATATGGTTATTTGGCACCAGAGTATGCACTATATGGGCAACTAACAGAGAAAAGTGATGTCTATAGTTTTGGAATTGTGATCCTTGAAATCATGAGTGGAAGAAAAGTGCTTGATACCATGAATTCATCTGTGGTTCTAATCACTGATTGGGCATGGACACTTGCAAAATCAGGACAGGTGGAGGAAATCTTTGATCAGTCAATAAGAAATGAAGGGCCAGAGAAAATCATGGAAAGGTTTGTTCTTGTTGGAATTCTTTGTGGTCATGCAATGGTAGCTTTAAGGCCTACTATTGCAGAGGCGCTCAAGATGTTAGAGGGTGACATTGACATTCCCAATTTACCAGATAGGCCAGTACCACTTGGTCATGAGTCATATCAATCTTCTCTGTTGCTTGGTTTGCAAAGAAGTGGAAGATCAACACCATTTATTTCATCTTATGCAACAAGTAGTATGAGCACAATATAG 1884 0.4023 MGLKTGVSGSITNPEMDKQVIFLPLFMSFFIIFIAGAASSSCPMDLSYVETFPWDTSTCRDPIDSQHCCQALLSLFGIGLAQHLKATSLFQLPDENTSSSCLSDFKLKLSALSIKPSLVPSCFRNSTQFVTNSSNCAGIHTIQDWKQKVGMMSPLDTSCNGDMSSQTKCSICTDAGLKVASQLTSIDPNATKCFYFAILYAAAIVNQLGPTDVGTAGCILGMPISTKGSSNREKVLKLVFGFLGAVIGVLLAFVLIIMYRKWDKRRKEDIYHRRIENSVRESVLPNTGAKWFHISELEKATNKFSQRNMIGQGGDGVVYKGTLSDGTLAAVKEIFDLDTKGDEEFCYEVEIISKIKHRNLLALRGCCVTSDNLKGKRRFLVYDFMPNGSLSYQLSIAGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKLKAKVSDFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTMNSSVVLITDWAWTLAKSGQVEEIFDQSIRNEGPEKIMERFVLVGILCGHAMVALRPTIAEALKMLEGDIDIPNLPDRPVPLGHESYQSSLLLGLQRSGRSTPFISSYATSSMSTI* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02515 627 SUPERFAMILY Protein kinase-like (PK-like) 289 594 IPR011009 -
Rops9g02515 627 Gene3D Phosphorylase Kinase; domain 1 265 384 - -
Rops9g02515 627 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 385 585 - -
Rops9g02515 627 FunFam Receptor-like serine/threonine-protein kinase At4g25390 269 384 - -
Rops9g02515 627 PANTHER OS01G0750732 PROTEIN 58 585 - -
Rops9g02515 627 SMART serkin_6 304 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02515 627 Gene3D Transferase(Phosphotransferase) domain 1 385 583 - -
Rops9g02515 627 Pfam Protein kinase domain 306 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02515 627 CDD STKc_IRAK 310 579 - -
Rops9g02515 627 ProSiteProfiles Protein kinase domain profile. 304 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02515 627 Pfam SPARK 38 193 IPR043891 -
Rops9g02515 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02515 Rops-Chr9 47249086 47250969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02515 34 599 Receptor kinase-like Gene Family AT1G11050 52.218 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Rops9g02515 Pkinase 5.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02515 - - gmx:100820563 1015.76