Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops9g02513 | ATGTTGAAGACGAAGGCATTTAACGGCGCTAACGTGTTCATGTCGCGAAACCTGGTGCCGCCTGAAGTCTTCGACGCGCTCCACGATGCCGTTAAAGTTAACGGCGCCCATATCCACCTTTGTTGCGATCCTTCACGCAATGGCCCCAACGATTACCACATCATTTCTTGTAGTAAACACGAGAAGTTTGAGGATCTTAAATCCAAGGGCTGTAAATTACTCGGCCCTAGATGTGTTCTTTCGTGTGCTAAAGAACAAAGGCCTCTGCCTAAACAAGGCTTCACTTGTTGTCTTGCCATGGATGGTGTCAAAGTACTTGCTTCTGGCTTTGATGCGGATGAGAAGGTTAAGATAGAAGAGTTAGTGACTGAAATGGGGGGAGTTCTACACACTAAAGCATCACTGGATTTGAACTTTGTCATTGTGAAAAATGTTTTAGCTGCAAAGTACAAGTGGGCTTTGAATATCCTGAAGAAACCAATAGTAACTCATGAATGGTTAAAGCAATGCTCAGATGAGCATCGTGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCCGGGTTAAAGATTTGTGTAACTGGAATTCCAGCAGATAAGCGCAAAGAGATGGAAAAACTTATCTTACAAAATGGTGGAAAATACTCTGCAGAACTGACAAAGAAGTGCTCGCATTTGATTTCTGATACTCCTGAAGGTGACAAATATAAGGTGGCAAAACGTTGGGGCCACATTCATATTGTGACAACGAAATGGTTTGTTCAATCTATTGCTCGAAGAGCATGTCTGAATGAGGAGTCTTATCCGGTTCAAAATGGATCTGTATCTTCAAATAAAGTAACTAGGGACTTAACAGCGCAACATAGCCAAGAAAAGGATATTGGGAAATCGCAATCTGTTGCAGCCTCAGGAGCTGCAGATTCAAATATGCCTGTTTTTTCTAGTGCTGAGTTCATGGATCGGGATCTCGAAGCGACACTGTCAGAGTATATGTCCTCTGTTTCAAATGTTCCTTTATTTGTTAAAGAGGCCGATGCTGAAGCACCTCCCTTGCAGACCAGCAATGAATTGAACTTTGATGGTGCTGTTGCCAATGATTCTGAATCTGATGATAATGACCTGTACTTATCAGAGTGCAGAATATTACTTGTTGGCTTTGAAGCTTCTGAAATGCGGAAACTAGTTAATATGGTGCGTAAAGGTGGAGGCTCCCGATATATGTCTTTTAATGACAAGTTGACGCACATAGTTATTGGGAATCCTACAGAAATGGAAAAGAAGGATGTAAGGAGTCTTGCTGCTTTGGGTGTCATTTATGTCGTTAAAACCTCATGGCTTGAAGATTGTGACCGTGAAAAGAAAGAAGTCCCTGTTCTTCGGAGACACATAGCACATGATCTACTTCTTCCAAAAGCTAGCTTAGTAAAGGGAGCAGTAACAGGCATTATGTCCGTGGATCAAGGTAAAAGCTCTGGCTTTCATCAAAGCTTGCAGTCTGATCAGGTGGTGGGTATTAAGGACTTTGGAGTTGTAATGCCAGAATCTTTGGAGAGAACCATACAAGAGAAACCAGATATGGGTACAAATGTTTTCACATTCAGTAAAGCAATGGGCAGAACTATGCTGCAAAATCAACTTCCTGATAATAAATTGAGGGTACAAAAGATGACACAACATGACTCCAATGTTCAACACTTGAAGCCAACAAATGTTTTCAGAGGGAAAACATTTTGTTTTTCAAATTCATTTCCTGAAGAAAGGAGAGCTGAGATTGTTCAATGGATAAGTCAAGGGGGAGGAGAGATGATAATAAGTAGGCAAACAAAACAGAGTGTCCACTACACTATTGAGTGTCATGGTGTAACACCCAGGTTGACAGGTGATTGCAAAAGTACGAATATTTCCAGTCACTGGATACGATCTTGTTTGGAGGATGGATCCTTGCTGGATGTTGACAGTCATATTCTTTATTCTCCACTTCCCTGCCGTGTCCCCTTGCCTGGGTTTGAAAGCTTCCGATTTTGTGTTTCACAATATGAAGAGAAAGACAGAATTCTACTGAGGAACTTGTGCTTTGTACTAGGAGCTAAATTTTTGGAAAAGTTGACTAAGAAGGCCACCCATTTGTTGTGTAAATTCACCAATGGGCCCAAGTATGAGGCTGCTTGTAAGTGGGGGATCCGATCAGTCACATCTGAATGGATATTTGAATGTGTCAAACAGAATGGGGTTGTTGCCATTGATCAATATTTACCCAAAGCAGTCACTGCTCAAGAACAAGAGGCAGGAATTTGCACCGTGAGTCAATTTCCTACCCAGGCTGCTCAAATGATAAGTGACGTGCCCTCCCAGTTTCCTAGTCAATCACAAAATTTGAGATACACGGCAAATAAAAATGTAAGTGATGGAGTCGAGAATCATGGGACTGATTCTAAAATATCTAGTATCAATAGCAAAAAGGCAAGGCTTGTGGAAGAACCTGGTCTGTCTGATAAGGTGCCTTCTGCAGTAAATTCAGGTATTCATGTCTATGACATGAACTTTTCTGAAAACAATACGCTTAAAGATTCTGCGGAAGCTTCTAATGCTGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACAAGTAAGATTCATGATCAGAGGTCCCCAGGGAGTACAGGGTGTGAGAGAAGAATTTACTCATCTGATTGTTCAGTCCTTGGTGAAGACAATTCAAATCCTCATACTGTCTTTGGATTATCTAAACACTGGTTAAACAGAAAAGATGATAATGGTGGGGCTTCTGAAGACAGAAGAGCAGGAATGTATGATGGTTTTAGTGAAACACAAACAGAATCTCAGGTTGTTGGTTATGAAGAAGATTTGTCAGGAAGGCAAATGCTTATAGATAGAGTCCGAATTCGAACATATGATAAAAATAAACTCAACCTTGGTCAGCTAATGGAGGAAACATATGCAGCAGTGAAAGGGGCAGAAGAAAAAGGGACTATCATGTGCTAA | 3015 | 0.4136 | MLKTKAFNGANVFMSRNLVPPEVFDALHDAVKVNGAHIHLCCDPSRNGPNDYHIISCSKHEKFEDLKSKGCKLLGPRCVLSCAKEQRPLPKQGFTCCLAMDGVKVLASGFDADEKVKIEELVTEMGGVLHTKASLDLNFVIVKNVLAAKYKWALNILKKPIVTHEWLKQCSDEHRVVPQESYKVLPFSGLKICVTGIPADKRKEMEKLILQNGGKYSAELTKKCSHLISDTPEGDKYKVAKRWGHIHIVTTKWFVQSIARRACLNEESYPVQNGSVSSNKVTRDLTAQHSQEKDIGKSQSVAASGAADSNMPVFSSAEFMDRDLEATLSEYMSSVSNVPLFVKEADAEAPPLQTSNELNFDGAVANDSESDDNDLYLSECRILLVGFEASEMRKLVNMVRKGGGSRYMSFNDKLTHIVIGNPTEMEKKDVRSLAALGVIYVVKTSWLEDCDREKKEVPVLRRHIAHDLLLPKASLVKGAVTGIMSVDQGKSSGFHQSLQSDQVVGIKDFGVVMPESLERTIQEKPDMGTNVFTFSKAMGRTMLQNQLPDNKLRVQKMTQHDSNVQHLKPTNVFRGKTFCFSNSFPEERRAEIVQWISQGGGEMIISRQTKQSVHYTIECHGVTPRLTGDCKSTNISSHWIRSCLEDGSLLDVDSHILYSPLPCRVPLPGFESFRFCVSQYEEKDRILLRNLCFVLGAKFLEKLTKKATHLLCKFTNGPKYEAACKWGIRSVTSEWIFECVKQNGVVAIDQYLPKAVTAQEQEAGICTVSQFPTQAAQMISDVPSQFPSQSQNLRYTANKNVSDGVENHGTDSKISSINSKKARLVEEPGLSDKVPSAVNSGIHVYDMNFSENNTLKDSAEASNAVPDVAAAIEDLLEQTSKIHDQRSPGSTGCERRIYSSDCSVLGEDNSNPHTVFGLSKHWLNRKDDNGGASEDRRAGMYDGFSETQTESQVVGYEEDLSGRQMLIDRVRIRTYDKNKLNLGQLMEETYAAVKGAEEKGTIMC* | 1005 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops9g02513 | 1004 | SMART | BRCT_7 | 184 | 261 | IPR001357 | - | |
| Rops9g02513 | 1004 | SMART | BRCT_7 | 667 | 743 | IPR001357 | - | |
| Rops9g02513 | 1004 | SMART | BRCT_7 | 570 | 647 | IPR001357 | - | |
| Rops9g02513 | 1004 | SMART | BRCT_7 | 97 | 174 | IPR001357 | - | |
| Rops9g02513 | 1004 | SMART | BRCT_7 | 374 | 454 | IPR001357 | - | |
| Rops9g02513 | 1004 | Pfam | BRCT domain, a BRCA1 C-terminus domain | 570 | 654 | IPR001357 | - | |
| Rops9g02513 | 1004 | ProSiteProfiles | BRCT domain profile. | 568 | 657 | IPR001357 | - | |
| Rops9g02513 | 1004 | SUPERFAMILY | BRCT domain | 186 | 272 | IPR036420 | - | |
| Rops9g02513 | 1004 | ProSiteProfiles | BRCT domain profile. | 182 | 271 | IPR001357 | - | |
| Rops9g02513 | 1004 | SUPERFAMILY | BRCT domain | 635 | 753 | IPR036420 | - |
Showing 1 to 10 of 33 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops9g02513 | K10728 | - | gmx:100804966 | 1523.45 |
Showing 1 to 1 of 1 entries