Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02504 ATGCAGTTATATCATCATCCGTTTGATTTGGACAGTCAGAAGGTGAGACTTGCATTGGAGGAGAAAAACATAGATTATACATCTTACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCCTCATTCTTCAGGATGAATCCCAGTGGAAGGCTCCCTGTTTTCCAAAATGGCTCTCACATCATTTACAATACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTAGTCTCCTCAGGGTCTGAGAGTATCATCAGTGCCAGTAGCAGGGAAATGAGTGAATGGATGCAGAAGATACAAGAATGGGATTCAAAGCTTTTCACACTTTCCCATATACCAGAGAAATACCGCCTTTATGTTTCCAAGTTCATAAGGCGAGTTTTGATTGCTCGTATGTCTGAGTCACCTGAATTAGCAGGTGCTTACCATAGGAAGTTAAGAGAAGCTTATCAGACTGAAGAGAAATTGAAACAACCAGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTAGATTGCTTGATGAAGTGGAGAGGCAGTTGAGTGAAACACGTTATTTGGCAGGTGAAGAGTTTAGCATGGCAGATGTGATGCTCATTCCAATATTGGCTCGTTTAGAACTCTTGGATTTAGAGAATGAGTACATAACTGGAAGGCCAAATATTGCTGAGTACTTAGTTATGGTTCAGCAGAGAGCTAGTTATAAAAAGGTGATTGGTAACTACTTTAATGGTTGGAGAAAGCACAAAACATTATTTAAAACATGGTGTTTAGTTCGTATTAGAAGTTTGCTGAAGAGGTACTAG 807 0.3928 MQLYHHPFDLDSQKVRLALEEKNIDYTSYHVNPITGKNLDSSFFRMNPSGRLPVFQNGSHIIYNTIDIIQYIERIAVVSSGSESIISASSREMSEWMQKIQEWDSKLFTLSHIPEKYRLYVSKFIRRVLIARMSESPELAGAYHRKLREAYQTEEKLKQPDVLRRSKEHLVRLLDEVERQLSETRYLAGEEFSMADVMLIPILARLELLDLENEYITGRPNIAEYLVMVQQRASYKKVIGNYFNGWRKHKTLFKTWCLVRIRSLLKRY* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02504 268 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Rops9g02504 268 SUPERFAMILY GST C-terminal domain-like 141 240 IPR036282 -
Rops9g02504 268 CDD GST_N_family 1 73 - -
Rops9g02504 268 CDD GST_C_family 148 226 - -
Rops9g02504 268 Gene3D Glutaredoxin 1 75 - -
Rops9g02504 268 Gene3D - 119 239 - -
Rops9g02504 268 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Rops9g02504 268 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Rops9g02504 268 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 268 IPR044617 GO:0004364
Rops9g02504 268 Pfam Glutathione S-transferase, C-terminal domain 162 226 - -
Rops9g02504 268 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 253 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02504 Rops-Chr9 46960426 46962683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02504 1 268 Glutathione S-transferase Gene Family AT1G77290 71.642 1.20e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02504 K22077 - gmx:100792543 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02504 9 46960426 46962683 Rops9g02504 9 46960426 46962683 ECH
Rops9g02504 9 46960426 46962683 Rops10g01953 10 35671434 35674020 PCT