Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02503 ATGAAAATGCTGCAAATGGGCACCGCCGGAGATGCCACCGACAGTGGCTCCGGTGGCCGGACGGTGGTGGTGGGTGTGAAGATGGAATCTAATAGTAGAGAGTTGTTAACTTGGGCATTGGTTAAAATGGCTCAGCCTGGTGATGTTGTGGTTGCTCTTCATGTTCTTGGAAATGATGAAATTGTGAATCGAGATGGGAAATCGTCTCTGTTTTCGCTTGTCAAAGCATTTGACTCTATTCTTGCTGTTTATGAAGGATTCTGCAATTTGAAACAGGTGGATCTCAAGCTCAAAATTTGCCGGGGTTCATCAGTGAGGAAAATTCTGGTTCGAGAAGCAAATGCATACTCAGCAACTCATGTTATCGTTGGAACTCCTCAAGGTCTTAATAAAATTCGGCCATCTATTTCTGTAGCTAGGTACTGTGCTAACAAGTTATCCAAGGATTGCTGGGTTCTGGCTGTTAATAATGGGAAAGTTGTGTTTAAGAGAGATGGCTCACCAGCAACTCGTGCTGACTTAAAAGGAATTGATCAGGATCACAAAAATGGGTTGCTCGGTTCTATTCACTGGACACTCAGCAAGAGTTCAAAAGTACTAAATGATGACAGCACAGGGATTCATTCAGATCACAGCTTAGCTAAGTTTTTTATGGATTCTAAAGAAGTCATTGAGAAGAAGAAGTGTTCTAGTTGTGCTTCTACCCAAGCATTGTCAGACTCATCATGCCACCAATCTGCAGAAGACTCTTCTGGTGATGCTAATAATGAGAACCCTTTGGCTATAGTGCCTTTACAGGCCAATGATGCTGCATCTAGAAGAGAAGTAACTGAATTGAAACCTGGTTGGCCACTGCTACGTAAGACAATTTTATCAGAGAGGCAATCTAATGAAAGATCATTGTTGCGCCAGATCCCTGTGGTACAATGGGCAATGCGGTTGCCCTCTAGAAATCTTTCATATGCTGCAGATCATAACCATAAAGCAAACAACTGTGACCAAGATAAAGATCAATTTTTGGGTCTAGATAGTAAAAGTGGTGCTCTTGTTCCAGTAGATGCTAAAATGAGGACCCTTGCTTCACCTGAACACAATTCAAGAAGCATTCCTAAAGAATTGGAGGGCCTTCATGAGAAATACTCATCCACTTGCAGTTTGTTTAAGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTACCTGAAAATTTGATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGCTGTCTTCCTGATGGAAAGGAACTTGCTGTTAAGATCTTAAAGCCTTCTGAGGATGTTTTGAAGGAGTTTGTTCTAGAAATAGAAATTATCACTACCTTGCATCACAAAAACATTATTTCCCTCCTTGGATTCTGCTTTGAGGATGGCAATCTTCTTTTGGTCTATGATTTCTTGTCAAGAGGAAGCCTTGAAGAGAACCTTCATGGTAATAAGAAAAATCCACTGGTGTTTGGTTGGAATGAGAGATATAAGGTGGCAATGGGAGTTGCCGAGGCCTTGGATTATCTGCATAATAAGGATGGCCAACCTGTGATCCACCGGGATGTGAAGTCATCAAATGTATTATTATCTGAGGATTTTGAACCCCAGCTCTCTGACTTTGGACTTGCTAAATGGGCATCAACCTCATCATCACATATAACATGCACAGATGTTGCTGGAACCTTTGGTTACTTGGCTCCTGAATACTTCATGTATGGTAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGTGGTGATTACCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGGAAGGTGTCACAATTGTTGGATCCTAGTTTGGGTGATAGCTATGACCAGGAAGAGATGGAAAGGATGGTCTTAGCAGCCACACTTTGTATCAAACGTGCTCCAAGAGCAAGGCCTCAAATGAGCCTTATCTCAAAGCTCCTTCAAGGTGATGCTGATGTGATCAAGTGGGCAAGGATAGAAGTTAATGCTTTGGAAGCATCAGAAATGCTTGATGAAGAAGCTTGTCCACCTTCTAATCTACAGTCACATCTTAATCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGTGTTGACCAGAATGTCTCATTGGAGGACTACTTGAGAGGCAGGTGGAGCCGTTCTTCAAGCTTTGATTGA 2238 0.4214 MKMLQMGTAGDATDSGSGGRTVVVGVKMESNSRELLTWALVKMAQPGDVVVALHVLGNDEIVNRDGKSSLFSLVKAFDSILAVYEGFCNLKQVDLKLKICRGSSVRKILVREANAYSATHVIVGTPQGLNKIRPSISVARYCANKLSKDCWVLAVNNGKVVFKRDGSPATRADLKGIDQDHKNGLLGSIHWTLSKSSKVLNDDSTGIHSDHSLAKFFMDSKEVIEKKKCSSCASTQALSDSSCHQSAEDSSGDANNENPLAIVPLQANDAASRREVTELKPGWPLLRKTILSERQSNERSLLRQIPVVQWAMRLPSRNLSYAADHNHKANNCDQDKDQFLGLDSKSGALVPVDAKMRTLASPEHNSRSIPKELEGLHEKYSSTCSLFKYQELVSATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSEDVLKEFVLEIEIITTLHHKNIISLLGFCFEDGNLLLVYDFLSRGSLEENLHGNKKNPLVFGWNERYKVAMGVAEALDYLHNKDGQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISGDYPKGQESLVMWASPILNSGKVSQLLDPSLGDSYDQEEMERMVLAATLCIKRAPRARPQMSLISKLLQGDADVIKWARIEVNALEASEMLDEEACPPSNLQSHLNLALLDVEDDSLSMCSVDQNVSLEDYLRGRWSRSSSFD* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02503 745 Gene3D HUPs 19 157 IPR014729 -
Rops9g02503 745 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Rops9g02503 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Rops9g02503 745 Pfam Protein kinase domain 403 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02503 745 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 152 - -
Rops9g02503 745 ProSiteProfiles Protein kinase domain profile. 399 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02503 745 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 368 473 - -
Rops9g02503 745 Gene3D Transferase(Phosphotransferase) domain 1 474 684 - -
Rops9g02503 745 SUPERFAMILY Protein kinase-like (PK-like) 380 672 IPR011009 -
Rops9g02503 745 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Rops9g02503 745 CDD USP_Like 21 152 - -
Rops9g02503 745 SMART serkin_6 399 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02503 745 Gene3D Phosphorylase Kinase; domain 1 363 473 - -
Rops9g02503 745 FunFam Putative receptor-like serine/threonine-protein kinase 474 686 - -
Rops9g02503 745 Pfam Universal stress protein family 20 152 IPR006016 -
Rops9g02503 745 PANTHER OS08G0249100 PROTEIN 225 684 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02503 Rops-Chr9 46872665 46876540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02503 385 666 Trihelix Transcription Factor Family AT1G68690 45.645 5.62e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Rops9g02503 Pkinase 6.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02503 - - pcin:129303222 1134.78