Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02497 ATGTCTAGCACAGCTGGTAAGGTCATCAAGTGCAGAGCTGCGGTGGCATGGGAGCCAGAGAAGCCACTGTCGATAGAGGAGATAGAGGTAGCACCACCCCTGAAGGATGAAGTGCGTTTGAAGATACTCTACACCTCCCTTTGCCGTACTGATGTTTACTGGTGGGATGTAAAGGGTCAGGCGCCACTGTTTCCTCGTATCTTAGGCCATGAAGGTTCAGGGATTGTGGAAAGCGTAGGCGAGGGTGTGACAAATCTCAAACCAGGTGACCATGTCCTACCAATATTTACAGGGGAGTGTGGTGAATGTGCACATTGTAAGTCAGAAGAAAGCAACTTGTGTGAGCTACTCAGAATCAACACTGATAGGGGAGTTATGCTCAGTGATGGAAAAACAAGATTTTCAAAAAATGGAAAACCCATTTACCACTTTGTGGGAACCTCTACCTTCAGTGAATACACTGTTTGCCATATTGGATGTGTTGCAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTGTCAGCTGTGGATTTTGCACAGGTTTTGGTGCTACTGTAAACGTTGCAAAACCAAAGCCTAATTCTACTGTTGCTGTCTTCGGATTGGGAGCTGTTGGTCTTTCTGCTGCTGAAGGAGCAAGGGTATCTGGTGCATCTAGAATCATTGGGGTTGATTTAGTTCCCGAACGATTTGAGGCAGCCAAAAAATTTGGGGTCACTGACTTTGTGAACCCGAAGGATCATAACAAACCTGTGCAACAGGTCATTGCTGAAATGACTAATGGAGGAGTAGATCGTGCTGTTGAATGTACTGGAAACATCCAAGCTACGATCTCAGCATTTGAATGTGTTCACGATGGGTGGGGTGTTGCTGTAATTGTTGGTGTGCCAACGCAGGATGCTGAATTCAAGACCAATCCTTTGAATTTCCTTTTAGGGAGAACTCTTAAGGGTACCTTCTATGGTGACTACAAACCCCGTTCTGATATTCCTGCTGTTGTGGAGAAGTACTTGAACAAGGAGCTGGAGCTGGAGAAGTTTATCACTCACTCTGTTCCATTCGCAGAGATTAATACAGCATTTGACTTAATGCTGAAAGGGGAGGGCATAAGGTGCATCGTCCGTGTGACAGAGTAA 1143 0.4576 MSSTAGKVIKCRAAVAWEPEKPLSIEEIEVAPPLKDEVRLKILYTSLCRTDVYWWDVKGQAPLFPRILGHEGSGIVESVGEGVTNLKPGDHVLPIFTGECGECAHCKSEESNLCELLRINTDRGVMLSDGKTRFSKNGKPIYHFVGTSTFSEYTVCHIGCVAKINPAAPLDKVCVVSCGFCTGFGATVNVAKPKPNSTVAVFGLGAVGLSAAEGARVSGASRIIGVDLVPERFEAAKKFGVTDFVNPKDHNKPVQQVIAEMTNGGVDRAVECTGNIQATISAFECVHDGWGVAVIVGVPTQDAEFKTNPLNFLLGRTLKGTFYGDYKPRSDIPAVVEKYLNKELELEKFITHSVPFAEINTAFDLMLKGEGIRCIVRVTE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02497 380 CDD alcohol_DH_plants 9 377 - -
Rops9g02497 380 Gene3D - 20 370 - -
Rops9g02497 380 SUPERFAMILY GroES-like 4 187 IPR011032 -
Rops9g02497 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Rops9g02497 380 FunFam Alcohol dehydrogenase 6 14 197 - -
Rops9g02497 380 Pfam Alcohol dehydrogenase GroES-like domain 36 160 IPR013154 -
Rops9g02497 380 SUPERFAMILY GroES-like 328 376 IPR011032 -
Rops9g02497 380 PANTHER ALCOHOL DEHYDROGENASE 6 375 - -
Rops9g02497 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 341 IPR036291 -
Rops9g02497 380 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
Rops9g02497 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Rops9g02497 380 Gene3D - 183 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02497 Rops-Chr9 46722080 46727591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02497 1 370 Monolignol Biosynthesis Gene Families AT1G72680 26.133 2.15e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02497 K18857 - gmx:100775490 656.366