Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02486 ATGGAACTAAAGACGAATCACGCGCAACTGTTAATGGTAGCATTAGCCATGGTAGTTGCAGTTGCAGTTGATCAAGCCCTTTCTGCAGCAGCAGCAGAAGCACAAAAACAAACCCTGCCTGGCTGCAATTCCACTTGTGGAAATGTCGAAATTCCATATCCATTCGGCATAGGAAATTCATCTATATCATCTCAACAACCCTGTTACATGGGTCCCGAATTTGAACTCGCCTGTAACGATTCCAAATTAACTTGGGGTGATGTTAACGTTTCACACATAGGCATCCAACAAGGTCAAATGGACGTGTCGTTTTTCGTCTCAAAGCTTTGTAAAGATGATCCCGATGGAAAGGCCAATGACCCTTTTCTCCAAAGTCCGTATTTCACCGTTTCAAGCAATGAAAACAAGTTCATAACAGTTGGCTGCGACACTTACGGGTATCTCAACAGCTTTTACAATGGGGACACTTATTCTACAGGGTGCTTGACAAGATGTTATGGAAGCAACCCTGATATGCAAATTGGAAATAGCGATGGGAATTGCACTGGTATAGGGTGTTGTCAAGTGGATATTCCACCTAGGATGAAGAATATCACTTTACAAGTCTACCAGTTCCCTAATTCCACAAGATCTGTGGAAAACTGCAGTTATTCCTTTATTGCAAAACGAGGCTCCTATCACTTTTCTGCCAAACATTTAGAATATCTACCCAACGAAACGTTCCCATTGGTTGTAAATTGGGCTGTTAGAAATGGACCATGTCAAACTGCCAAGAGTAGAGATGACTATGCCTGCAAGGCAAATAGCGAGTGTGACGACAAGGACACAGATTACGGCTACCGATGCAAATGTCTTGACGGTTACGAAGGAAACCCGTACCATCCGGATGGTTGTAGAGACATTGACGAATGTACGACACCAAATCATAAATGCATAAGTAAAGAGAATTGTATGAACACCAATGGGTCTTACACATGCTTCTGTTCTAAGGGGCATTCCGGAGATGGAACAAAGGAAGGAGGGTGTCGCAGACGTGATGTAATTACCAAAGTCATCATTGGAGTAGGAGCAGGAGTTATTTTGCTATTTGTGGGGACTTCCTCACTGTACTTAATGTACCAGAAAAGGAAACTCATCAAAGTCAAAGAGAAATTCTTTCAGCAGAATGGTGGTTTCATTTTGCTACAGCAACTCTCCACGAGAGAAGACTCCTCCCAAACTGCTCAAATTTTCACAGAAGATCAACTAAAGAAGGCCACCAACAACTATGACGAGGGCTTGATTATTGGCAGAGGAGGTTTTGGTACAGTTTTCAAAGGATTCCTAGCAGATAACAGAATTGTTGCTGTCAAGAAATCCAAAATAATAGATGCGAGCCAAATCGAGCAATTCATTAACGAGGTGGTTGTTCTATCCCAAATCAATCACAGGAATGTGGTCAAACTCTTGGGATGCTGTTTGGAGACGGAAGTTCCTTTACTGGTTTATGAATTTGTTAGCAATGGTACCCTTTTTAATTTTATACACACTGAAGGCAAGGTGAATAATGTAACATGGAAAACACGTCTAAGGATAGCAGCAGAGGCAGCAGGTGCTCTATCATATTTGCATTCAGCTGCCTCCATACCCATCATCCATAGAGATGTCAAGAGTACTAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCGCTTGATCAAACTGACATAGCCACAATGGTGCAAGGGACTATTGGATACTTAGACCCAGAGTATATGCAAACAAGCCAACTCACTGATAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTGCAGAGCTGCTAACAGGGGAGAAACCTATTTCTTTTGACAGGCCAGAAGAGAAAAGAAGCCTTGCAATGCACTTGCTGTCTTGCTTGAAAGAGGATTGCTTGTTTGAAATTCTTCAAGTTGGTATCTTGAATGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTGTTGGGGAGGAAAGACCTAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAATAAGGATGATGGAGAAGCACCCTTGGACCAATACAGACCAAAATCTAGAGGAGACTCAATACTTGCTTCGTGAGGCATCATCTAGCATTTATGAACCAGGTGATAGCAGCAACCATGGATATACTGGGTATGACAGCTTGAGAGATCATGTACTAATTGCCTTGGATGATGGGAGATGA 2265 0.4243 MELKTNHAQLLMVALAMVVAVAVDQALSAAAAEAQKQTLPGCNSTCGNVEIPYPFGIGNSSISSQQPCYMGPEFELACNDSKLTWGDVNVSHIGIQQGQMDVSFFVSKLCKDDPDGKANDPFLQSPYFTVSSNENKFITVGCDTYGYLNSFYNGDTYSTGCLTRCYGSNPDMQIGNSDGNCTGIGCCQVDIPPRMKNITLQVYQFPNSTRSVENCSYSFIAKRGSYHFSAKHLEYLPNETFPLVVNWAVRNGPCQTAKSRDDYACKANSECDDKDTDYGYRCKCLDGYEGNPYHPDGCRDIDECTTPNHKCISKENCMNTNGSYTCFCSKGHSGDGTKEGGCRRRDVITKVIIGVGAGVILLFVGTSSLYLMYQKRKLIKVKEKFFQQNGGFILLQQLSTREDSSQTAQIFTEDQLKKATNNYDEGLIIGRGGFGTVFKGFLADNRIVAVKKSKIIDASQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFNFIHTEGKVNNVTWKTRLRIAAEAAGALSYLHSAASIPIIHRDVKSTNILLDDTYTAKVSDFGASRLVPLDQTDIATMVQGTIGYLDPEYMQTSQLTDKSDVYSFGVVLAELLTGEKPISFDRPEEKRSLAMHLLSCLKEDCLFEILQVGILNEENKQEIKEVAILAAKCLRLVGEERPSMKEVAMELEGIRMMEKHPWTNTDQNLEETQYLLREASSSIYEPGDSSNHGYTGYDSLRDHVLIALDDGR* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02486 754 FunFam Wall-associated receptor kinase 2 393 498 - -
Rops9g02486 754 ProSiteProfiles Protein kinase domain profile. 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02486 754 Gene3D Plasmodium vivax P25 domain 245 348 - -
Rops9g02486 754 SMART serkin_6 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02486 754 SUPERFAMILY EGF/Laminin 300 335 - -
Rops9g02486 754 SMART egfca_6 300 343 IPR001881 GO:0005509
Rops9g02486 754 Pfam Calcium-binding EGF domain 300 339 IPR001881 GO:0005509
Rops9g02486 754 SMART egf_5 303 343 IPR000742 -
Rops9g02486 754 SMART egf_5 253 299 IPR000742 -
Rops9g02486 754 CDD STKc_IRAK 429 696 - -
Rops9g02486 754 Pfam Protein kinase domain 425 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02486 754 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Rops9g02486 754 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
Rops9g02486 754 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 703 IPR045274 GO:0007166
Rops9g02486 754 CDD EGF_CA 300 335 - -
Rops9g02486 754 Gene3D Transferase(Phosphotransferase) domain 1 499 720 - -
Rops9g02486 754 Pfam Wall-associated receptor kinase galacturonan-binding 42 95 IPR025287 GO:0030247
Rops9g02486 754 FunFam Fibrillin 2 295 339 - -
Rops9g02486 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Rops9g02486 754 SUPERFAMILY Protein kinase-like (PK-like) 404 694 IPR011009 -
Rops9g02486 754 Gene3D Phosphorylase Kinase; domain 1 393 498 - -
Rops9g02486 754 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Rops9g02486 754 ProSitePatterns Calcium-binding EGF-like domain signature. 300 326 IPR018097 GO:0005509
Rops9g02486 754 FunFam Wall-associated receptor kinase 2 499 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02486 Rops-Chr9 46488731 46491794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02486 7 754 Receptor kinase-like Gene Family AT1G21230 43.896 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops9g02486 Pkinase 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02486 - - gmx:106795446 1041.95