Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02478 ATGGCAGGCACCACCCTTTCAATGCAAGAATCTGTGAAGTCTGATGAACTTACGAACTCTCCAAGCGCAGATGTAGACGTGATTTGCGAGAAGGCAGGAGCCTCAAATGGCATGGCCATTGTGGATATTAATTCGGAGTTGAATGATTCTCAAGTTTGGAGTTCTTATGCCCCTGATATATACAGCAACATTCGAGTCACAGAGCTTGAAAAGAGACCATTACCCACCTACATGGATCAGTTGCAGCGAGATATTACTGCAAGCAGGGGTGGAATTCTGGTTGATTGGCTTATGGAGGTTTGTGAGGAATATAAGTTGGTTCCAGACACTCTTTACCTGATAGTAAACCTCATTGATCGGTTTCTCTCAACAAGTTTGATTCAGAAACAAAGGCTTCAGTTGGTTGGTGTTACTTGCATGCTGATTGCATGA 432 0.4352 MAGTTLSMQESVKSDELTNSPSADVDVICEKAGASNGMAIVDINSELNDSQVWSSYAPDIYSNIRVTELEKRPLPTYMDQLQRDITASRGGILVDWLMEVCEEYKLVPDTLYLIVNLIDRFLSTSLIQKQRLQLVGVTCMLIA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02478 143 Gene3D - 59 72 - -
Rops9g02478 143 Pfam Cyclin, N-terminal domain 59 143 IPR006671 -
Rops9g02478 143 PANTHER CYCLINS 42 143 IPR039361 -
Rops9g02478 143 SUPERFAMILY Cyclin-like 48 143 IPR036915 -
Rops9g02478 143 Gene3D - 73 143 - -
Rops9g02478 143 FunFam G2/mitotic-specific cyclin 73 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02478 Rops-Chr9 46235905 46236336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02478 18 143 Core Cell Cycle Gene Families AT1G80370 52.381 1.47e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02478 K06627 - gmx:547780 216.468