Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02476 ATGGAAAGCACGTCTAAGGATAGCGGCAGAGGCACTGGAGCTCTATCATATTTGCATTCAGCTGCCTCCATACCCATCATCCATAGAGATGTCAAAAGTACTAACATTCTCTTGGATGACACTTACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCGCTTGATCAAACTGACATAGCCACAATGGTGCAAGGGACTATTGGATACTTAGACCCAGAGTATATGCAAACAAGCCAACTCACTGATAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTGCAGAGTACGCTAACAGGGGAGAAACCTATTTCTTTTGA 327 0.4312 MESTSKDSGRGTGALSYLHSAASIPIIHRDVKSTNILLDDTYTAKVSDFGASRLVPLDQTDIATMVQGTIGYLDPEYMQTSQLTDKSDVYSFGVVLAEYANRGETYFF* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02476 108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 26 38 IPR008271 GO:0004672|GO:0006468
Rops9g02476 108 Pfam Protein kinase domain 14 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02476 108 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 100 IPR045274 GO:0007166
Rops9g02476 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02476 108 SUPERFAMILY Protein kinase-like (PK-like) 14 101 IPR011009 -
Rops9g02476 108 Gene3D Transferase(Phosphotransferase) domain 1 12 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02476 Rops-Chr9 46161752 46162078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02476 13 98 Receptor kinase-like Gene Family AT1G79670 74.419 6.18e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops9g02476 Pkinase 3.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02476 - - gmx:106795446 159.458