Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02475 ATGCTCTCTCGCGACCCCTATGTCGTCAGGTTAATGGATGTGAAACAAGGTCAGAACAAGGAAAGGAAGACAGTGCTCTACTTGGTCTTTGAGTACATAGAAACCGATCTCAAGAAATTCATTCACAGTTTTCGTCAAACTAGAGAAAACATCCCACCCAGAACCATCAAAAACTTGATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCACGACCATGGAAAGTTGCATAGGGACTTAAAGCCTCACAATCTCTTGATGGACCAAAAAACATGA 276 0.4275 MLSRDPYVVRLMDVKQGQNKERKTVLYLVFEYIETDLKKFIHSFRQTRENIPPRTIKNLMYQLCKGVAFCHDHGKLHRDLKPHNLLMDQKT* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02475 91 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02475 91 PANTHER CELL DIVISION PROTEIN KINASE 5 89 - -
Rops9g02475 91 SUPERFAMILY Protein kinase-like (PK-like) 4 90 IPR011009 -
Rops9g02475 91 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Rops9g02475 91 Pfam Protein kinase domain 5 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02475 Rops-Chr9 46144801 46145076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02475 1 91 Core Cell Cycle Gene Families AT1G20930 79.121 2.17e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Rops9g02475 Pkinase 3.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02475 K07760 - gmx:100799839 165.236