Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02466 ATGGAAAACCCGTCTTATGTAATAATTGCGTGTGATACCACGAAAGATCGCAATGAGCATGAGATCAAGCTTGTTGTTGATCACCTTCGAAGCAGAGGTGGCATTCTATCTGCAGGTGACAACTTGCTTGTGCTTGGTGCCTTGCATAAGGTGCCACATCCAATGGGATACCAGACATTAGCATGCCCGGAGTCATTTGTTGGCACGAACATTCGTGCAATGAAGGAAGAAGTTATTAGGAAAGTTGATGCATATAAAAGTGTGCTTCTGCCTAGTTATGAAGAATGTGAAAATAAAGGGGTCAGCATCGAAGTTAAAGTCACTGCAGGTTTTCCAATTAGACAGGTTATTGTACAAGAAGTTACAAATTACAATGCATCTTGGGTTATTCTTGATAGGCATCTTCGGCGTGACCTTAGATTTTACAAGAACAAGATATCTTGTAAGATTGCGCTTGTTAAAGATGATTTGTCGGTGGATATTTGGAGATCTCACCATATATATGAAACAGATGTCACAGGACAAAAGCTTATCTATTCTTTGTCAAAGTGTGTTTCACTATCAGATTGTCAAAGTAATGAAGACCTGGAGCAAACAGTTATCTTTTGCAAAAGTTATCCCCTTTCCATAACTTCTTCTGAAAGCTCTAATATGTTCAAGAGCAGTATGAGACAATCAAATGCTAACAGGTCAGAGGAGCTTAGTTCTTCAACAGATTTTGGGTCTTCTTCAGGCATAAGCAGCAAAGGAGAATATAAGCATCCCATTACTTCACATATTTTCCAAAAGCAAAACAAATATGGTTTTCTATCAAATTCTTCAGATGCTCCAATTCTTTGTGTTGGTTGTGGGACAAGGACTGAATTATATACCAAGGAGTTAATAAAGTTCAGCTATTCGGATATACAACTAGCAACAAATGATTTTTCAAAAGATAACTTATTAGGTGAAGGTGGATATGGTCACGTATACAAGGGTATGCTTAAAGGTGGACAACAAATAGCTGCAAAAGTAAGGAAAGAAGAAAGCTCACAAGGGTTTTCTGAATTCCATTCTGAGGTTTATGTCTTGAGTTTTGCTCGACATAAGAATATAGTGATGCTTTTCGGCTACTATTGCAAGGAAAGGCTAAATATTTTGATAAAAATGCGGAAGTTCTACCGTGGCACCAAAGATATGCTATTGCCATTGGAACTGCAAAGGGATTGCGTTTTCTACATGAGGAATGTCGTGGAGCTAGGTGACTTCGGCCTTGCCAAATGGAAGACTGGTGATAATACTCTACATACAAGGATAATAGGCACACTAGGATACCTTGCTCCTGAGTATGTGGAAGATGGTATTGTTTCTGAGCGGATAGATGTGTATGCTTATGGCATTGTTCTATTACAATTGATATCTGGACGCCGGGCCAATTCTAGTCCAGAGCAACATCTCTCTCTCCGACAATGGGCTGACCAAAAGATTAAGAAGTTAGCTTTTCATGAACTCATTGACTCTCGTCTTGGGGAGTCATATAAGTCAAATGAGCTTTACATCATGGCGAAAGTTGCATACTACTGTGCACAAAGAAATCCTGAGAAGCGCCCAACAATGGGAGAGGTTGTGCGTCTTCTTGAGGGACAAAATGACCACTTCCGCTTCATTGGAGAACAATTCGTACCAAGATATAATATGTGA 1680 0.3952 MENPSYVIIACDTTKDRNEHEIKLVVDHLRSRGGILSAGDNLLVLGALHKVPHPMGYQTLACPESFVGTNIRAMKEEVIRKVDAYKSVLLPSYEECENKGVSIEVKVTAGFPIRQVIVQEVTNYNASWVILDRHLRRDLRFYKNKISCKIALVKDDLSVDIWRSHHIYETDVTGQKLIYSLSKCVSLSDCQSNEDLEQTVIFCKSYPLSITSSESSNMFKSSMRQSNANRSEELSSSTDFGSSSGISSKGEYKHPITSHIFQKQNKYGFLSNSSDAPILCVGCGTRTELYTKELIKFSYSDIQLATNDFSKDNLLGEGGYGHVYKGMLKGGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLFGYYCKERLNILIKMRKFYRGTKDMLLPLELQRDCVFYMRNVVELGDFGLAKWKTGDNTLHTRIIGTLGYLAPEYVEDGIVSERIDVYAYGIVLLQLISGRRANSSPEQHLSLRQWADQKIKKLAFHELIDSRLGESYKSNELYIMAKVAYYCAQRNPEKRPTMGEVVRLLEGQNDHFRFIGEQFVPRYNM* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02466 559 MobiDBLite consensus disorder prediction 221 247 - -
Rops9g02466 559 Pfam Protein tyrosine and serine/threonine kinase 312 381 IPR001245 GO:0004672|GO:0006468
Rops9g02466 559 ProSiteProfiles Protein kinase domain profile. 309 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02466 559 SUPERFAMILY Protein kinase-like (PK-like) 293 541 IPR011009 -
Rops9g02466 559 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 281 382 - -
Rops9g02466 559 Gene3D Phosphorylase Kinase; domain 1 282 379 - -
Rops9g02466 559 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Rops9g02466 559 PANTHER OS01G0253100 PROTEIN 224 380 - -
Rops9g02466 559 Gene3D Transferase(Phosphotransferase) domain 1 380 551 - -
Rops9g02466 559 Pfam Protein kinase domain 408 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02466 Rops-Chr9 45845027 45864087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02466 297 540 Trihelix Transcription Factor Family AT5G38560 34.948 9.03e-43 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Rops9g02466 Pkinase 1.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02466 - - vun:114163670 723.776