Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02454 ATGACTACCATTGATGAATTAAACAATGTTGACACATGTCCTGGAATTGATGATATTGGTAGTGGTGGTGAGGCATTGCATTGTGATGGTACAAGTGGAGACCCAGAAGTAGGGATGTCGTTTACTTCTGAAGAAGACTTGAAATCATTTTATTCATCACATTGTTGTAGAAAGGGTTTTGGATGGAAGATAAGGACTACCAAAAAGGCAGATGATGGGAAAATAAATTACATCATACTATCATGCTCAAGAGAGGGTAATCGTAAATCCTCCATATCAACTACATTGAAGACACTTCCAACAAAAGCAAAAAATTGTAAGGCCAAGTTAACTGCTAGGTTAGAAGAAGATGGACGATGGTACATACGGACGGTTATACATGACCACACTCACCAACTCAATCCAAAAATATCCAGGTTGTTCATAGTGAACAAGAACATGGATATGCATGTGAGGAGAACAATTCAAATGAATGATGGTGCTGGGGTAAGGATTAACAAGACATTTCAGTCTCTTGTTGTAGATGCAGGCGGACACGAGAACTTATCATTTGTAGAAAAAGATATTCGAAATTATGTGTCTAAGGAAAGACGTGCAATTGGAAATGAGGGTGATGATGCTAGGAGTATAGCCACATATGAATCATTTGGAGATGTTGTCACTTTTGACACCACATACTTGACAAACAAATATGACATGCCATTTGCTGCATTTGTTGGTGTCAATCACCACGGGCATTCACTGATTTGTTAG 753 0.3851 MTTIDELNNVDTCPGIDDIGSGGEALHCDGTSGDPEVGMSFTSEEDLKSFYSSHCCRKGFGWKIRTTKKADDGKINYIILSCSREGNRKSSISTTLKTLPTKAKNCKAKLTARLEEDGRWYIRTVIHDHTHQLNPKISRLFIVNKNMDMHVRRTIQMNDGAGVRINKTFQSLVVDAGGHENLSFVEKDIRNYVSKERRAIGNEGDDARSIATYESFGDVVTFDTTYLTNKYDMPFAAFVGVNHHGHSLIC* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02454 250 Pfam MULE transposase domain 219 250 IPR018289 -
Rops9g02454 250 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 199 - -
Rops9g02454 250 Pfam FAR1 DNA-binding domain 49 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02454 Rops-Chr9 45488134 45488994 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops9g02454 FAR1 5.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02454 - - psat:127130074 296.975