Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02448 ATGTCATTGGTCATATCTGCAGAGCTGGCTGATACATCATATAGGGATGCCAAGCTCTACTCGATAAAGGGAACTGATGTAAAACCTGGCTTGTCCTCCCATAATTTTGCTCCTGATAAGAACAGAAACATGTACATGACAGATTCCTACTCTAGTGAGAGTTATGAAAAGTACTTCCTTGATTCACCTACAGAAGAACTGATAGAACCATCTAGTTCCAGCATATCAGGAAATTCAATTCACCCTGATGGTGCTTCTTCATACCAGCTCAGAGCTAGTTCAGGACCTTCTATGGTGGCTGACAACCCATTTGATACTTCCTTCTTGTCTACAAGGCATCGTGATGCCTATCAGTCCAACCTTGGATCAGATTTCTTGGAAAATGAGAGCCTGGATTGTCTTGACTTTGATGGTGAAATGCGATTAAAACTGCAAGAATTGGAGAGGGCATTGCTTGCTGATAACAACGAGGAGGAGGAAGAGGAGGAAGACATATTTGAGACTGTTCAAAGCATGGAAATTGATCCTGACATTGCTGAGTGGACCGATCCCATTCAGAATATGCTGCAGCATGACTCACCCAAGGAATCTTCATCCTCAGATTCCAATCTTAGTAGCATCAGTAGCACCAAAGAAATATCGCAAAATTCTCCTCAGACACCCAAGCAATTGCTTTATCAATGTGCTAATGCAATTGCAGAAGGGAATGAAGTGGAAGCCTCATCTATGATAAATGATCTCAGGCAGATGGTCTCAATTCAAGGAGATCCTTCCCAAAGAATTGCAGCCTATATGGTGGAAGGACTTGCGGCTCATGTGGCTTCATCTGGAAAATGTATTTACAAAGCTTTGAAATGCAAGGAACCTCCTTCTTCGGATCGCCTAGCAGCCATGCAGATACTATTTGAGGTGTGCCCATGTTTTAAATTTGGAATTATTGCTGCAAATGGTGCAATTGAAGAGGCTGTTAAGGATGAAAAAAAGGTTCACATAATAGATTTCGACATCAATCAAGGAAGTCAATACATTACTCTAATACAAACACTTGCTTCAAGGCCAGGTAAGCCACCACGTGTGAGATTAACCGGGGTTGATGATCCTGAGTCTGTGCAAAGATCTGTTGGAGGCCTAAATATCATAGGACAAAGACTTGAAAAGCTTGCAGAAGCACTTGGATTACCATTCGAGTTTCGAGCCGTGGCATCAAGGACTTCCATTGTCACTCCATCAATGCTCAATTGTCGTCCCGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAAAGTGTATCAACAGTTAACGAAAGAGACCAGCTTCTTCGCATGGTTAAGAGCCTGAATCCAAAACTTGTAACAGTTGTGGAACAAGACATGAACACTAACACCTCCCCCTTTCTTCCGAGATTCAGTATAGCCTATGATTACTACTCTGCTGTGTTTGACACACTCGATGTCACTCTCCCTAGAGAGAGCCAGGACAGGATGAATGTGGAAAGGCAATGCTTGGCAAAGGACATTGTCAACATTGTTGCATGTGAGGGTGAGGATAGAATAGAACGGTATGAAGTTGCTGGAAAATGGAGGGCAAGGATGACTATGGCTGGCTTCACTTCTTCCCGTATGAGCACAAATGTGAAGGAATCAATTAGGGAACTCATTAAGCAGTACTGTGACAGGTTCAAGATTAAGGAGGAAATGGGGGCACTTCATTTTGGATGGGAACAGAAAAACTTGATTGTTGCTTCTGCATGGAAGTGA 1776 0.4307 MSLVISAELADTSYRDAKLYSIKGTDVKPGLSSHNFAPDKNRNMYMTDSYSSESYEKYFLDSPTEELIEPSSSSISGNSIHPDGASSYQLRASSGPSMVADNPFDTSFLSTRHRDAYQSNLGSDFLENESLDCLDFDGEMRLKLQELERALLADNNEEEEEEEDIFETVQSMEIDPDIAEWTDPIQNMLQHDSPKESSSSDSNLSSISSTKEISQNSPQTPKQLLYQCANAIAEGNEVEASSMINDLRQMVSIQGDPSQRIAAYMVEGLAAHVASSGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGIIAANGAIEEAVKDEKKVHIIDFDINQGSQYITLIQTLASRPGKPPRVRLTGVDDPESVQRSVGGLNIIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFLPRFSIAYDYYSAVFDTLDVTLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARMTMAGFTSSRMSTNVKESIRELIKQYCDRFKIKEEMGALHFGWEQKNLIVASAWK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02448 591 ProSiteProfiles GRAS family profile. 212 591 IPR005202 -
Rops9g02448 591 Coils Coil 141 164 - -
Rops9g02448 591 MobiDBLite consensus disorder prediction 189 219 - -
Rops9g02448 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 199 586 IPR005202 -
Rops9g02448 591 MobiDBLite consensus disorder prediction 68 94 - -
Rops9g02448 591 Pfam GRAS domain family 222 591 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02448 Rops-Chr9 45429795 45433482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02448 1 591 GRAS Transcription Factor Family AT1G21450 62.709 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops9g02448 GRAS 3.4e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02448 - - gmx:100796434 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02448 9 45429795 45433482 Rops9g02448 9 45429795 45433482 ECH
Rops9g02448 9 45429795 45433482 Rops10g02002 10 36514028 36517389 PCT