Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02443 ATGGTGCCTCCTGGGCCACCCAATCAGATTGGTGGTGGCCAGTCTGTGTCGCCTTCACTTTTGAGATCGAATTCTGGAATGTTGGGGGGTCAAGGTGGTCCTGTGCCTTCACAGGCTTCATTCCCTTCGTTGGTTTCACCACGAAATCAGTATAACAACATGAATATGCTAGGAAACATGTCCAATGTTACTTCCATACTGAACCAGTCTTTCCCGAACGGAATTCCAAATTCCGGGCTCTCTGGTCCCGGAAGTAGCCAGTGTGGTGGTGTGGATTCCAGGGCGGAACAGGATCCACTGTCCGGTGTTGGCAATGGGATGAACTTTGGCAATCCTTCGTCGTTGTCGTTTGTGCAATCGAATGTGGTGAACCCTGGTTCATCTGGTCAAGGTCAGGGTCAGGGTCAGGGTCAGCAATTTTCAAATCCTTCTGGTAACCAGCTGTTGCCGGATCAACAGCATTCCCAACAAATTGAAGTTCAAAATTTCCAACATAGTCAGCAGCAGTCAATGCAACAGTTTTCGACCCCTCTGAATACTCAGCAACAACAGCAGCAGCAGCATTTTCAATCGATGCGAGGAGGGATGGGTGGTGTTGGACCTGTGAAGCTGGAGCCCCAGGTAAACAATGATCAGTTTGGGCAGCAGCCACAGCAGCAGTTGCCATCGTTGAGGAATCTTGCTTCGGTGAAATTGGAGCCGCAACAACTTCAAACAATGAGAGCTCTCGCACCAGTAAAAATGGAGCCTCAGCATACTGATCAGCCATTTTTGCATCAACAACAGCAGCAGCAGCAACAACAACAACTCCTCCAGATGTCAAGGCAATCCTCTCAGGCTGCTGCTGCACAGATGAATCTTTTGCATCAACAGAGACTTTTGCAATTCCAACAACATCAGCAGCAGCAACTCTTAAAGGCAATGCCTCAACAACGGCCCCAATTACCACAACAGTTTCAGCAGCAGAATATGCCTATGAGGTCTCCTGTGAAACCAGCATACGAACCTGGGATGTGTGCTAGGCGGTTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATTGATTTCTGGAGGAAATTTGTTGCTGAGTATTATGCTCCTAATGCCAAAAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCAAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAACTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAGATAGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTGCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCTAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCATTAACTCAAAATGCAACACCCAATTTATCCGTTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTAGAAGTTCCCTTGGTTAATGATTTAGGATATACGAAGAGATATGTGCGGTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCACGGAAACAAGGACTGGACCTATGGACAGCTTAGCCAAATTCCCTCGGAGAACAAGTGGTTCATCTGGAGTTCATAGTCAGGCACGACAGTCTGAAGATCAATCACTGCAGCAGTCACAACAGCAACATCAGCATATGGTGGCCCATACCTCAAATGGTGATCAAAACTCTCTGCAAACTGCTGCCATGCAAGTTGCTTCTAGCAATGGTGTAAATAACAGTGTCAATTCAGCATCTGCGTCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAACTCTATGAATTCTAGACAAAACTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTACAGTGCCACAAGCACAACCAAACCCATCCCCTTTTCAATCACCAACACCATCCTCATCTAACAACCCTCAAACATCTCACCCTGCCTTAACATCTGCAAATCACATGGGTACAGTGAACTCACCAGCTAATATTTCCTTGCAGCAACAGCAGACATCTCTTTCTGGTGAAGCTGACCCTAGCGATGCTCACGGCTCAGTCCAGAAAATTATTCATGAGATGATGATGTCCTCCCAGATAAATGGCACAGGTGGAATGGCAGGTGCTGGTTCTCTCGGAAATGACGTGAAGAATGTAAATGGGGTTTTACCAGTGAGTTCCAATACAGGGCTCAACAATGGCAATGGCCTGATGGGTAATGGGGCTGTGAACAATAATTTAGGTGCTGGGGCTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTTTATCCAATGGAATGAGACCTGCAATGGGAAATAATTCAATCATGAATGGAAGGGGAGGAATGGCATCTATTGCTAGGGATCAAGCTATGAATCATCAACAAGATCTATCAAGCCAACTACTTAGTGGGCTAGGAGCAGTAAATGGTTTCAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2742 0.4519 MVPPGPPNQIGGGQSVSPSLLRSNSGMLGGQGGPVPSQASFPSLVSPRNQYNNMNMLGNMSNVTSILNQSFPNGIPNSGLSGPGSSQCGGVDSRAEQDPLSGVGNGMNFGNPSSLSFVQSNVVNPGSSGQGQGQGQGQQFSNPSGNQLLPDQQHSQQIEVQNFQHSQQQSMQQFSTPLNTQQQQQQQHFQSMRGGMGGVGPVKLEPQVNNDQFGQQPQQQLPSLRNLASVKLEPQQLQTMRALAPVKMEPQHTDQPFLHQQQQQQQQQQLLQMSRQSSQAAAAQMNLLHQQRLLQFQQHQQQQLLKAMPQQRPQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYYAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSADLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQALTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSTETRTGPMDSLAKFPRRTSGSSGVHSQARQSEDQSLQQSQQQHQHMVAHTSNGDQNSLQTAAMQVASSNGVNNSVNSASASTTTSTIVGLLHQNSMNSRQNSMNNASSPYGGSSVQIPSPGSSSTVPQAQPNPSPFQSPTPSSSNNPQTSHPALTSANHMGTVNSPANISLQQQQTSLSGEADPSDAHGSVQKIIHEMMMSSQINGTGGMAGAGSLGNDVKNVNGVLPVSSNTGLNNGNGLMGNGAVNNNLGAGAGGYGTMGLGPSGLSNGMRPAMGNNSIMNGRGGMASIARDQAMNHQQDLSSQLLSGLGAVNGFNNLQFDWKPSP* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02443 913 PANTHER LIM DOMAIN-BINDING PROTEIN 215 902 IPR029005 -
Rops9g02443 913 MobiDBLite consensus disorder prediction 74 92 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 682 716 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 726 749 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 104 184 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 682 749 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 600 640 - -
Rops9g02443 913 Pfam LIM-domain binding protein 342 596 IPR029005 -
Rops9g02443 913 MobiDBLite consensus disorder prediction 10 26 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 1 46 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 586 640 - -
Rops9g02443 913 MobiDBLite consensus disorder prediction 74 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02443 Rops-Chr9 45396560 45404891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02443 1 812 C2H2 Transcription Factor Family AT1G43850 63.572 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02443 - - gmx:100798031 1281.54