Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02434 ATGGGTAGGTGTTGGTTGGTTGGGGTCTTAATTGTGGTGGGGTGTGCCAGCTTGTTGGGCACTGTTTGGGTAGAAGGGTATCCAGTTGAGGATCTGGTTGTGAGACTCCCTGGCCAACCCAAAGTTGGGTTTAAACAGTATGCTGGGTATGTTGATGTAGATGTCAAGCATGGAAGGAGCTTGTTCTACTATTTTGTGGAAGCTGAGAAAGACCCTGACAAGAAGTCCCTCACACTTTGGCTCAATGGAGGTCCGGGATGTTCCTCCATTGGAGGAGGTGCTTTTACTGAATTGGGACCCTTTTATCCTAAAGGTGATGGACGTGGTCTCCGAATAAATTCCAAGTCTTGGAATAGAGCTTCCAATCTCCTTTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACTACTTCAGATTATAGCACTGGAGATGCATCCACTGCCAATGATATGCATTTGTTCATGCTGAAATGGTACGAGAAGTTTCCATCATACAGATCAAGGGAGCTGTTCCTTACTGGAGAAAGCTATGCAGGACACTACATACCACAGTTAGCTAATGCTCTACTGGACCATAATGCTCGTTCAAATGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTCTAAAACTTGATCGGGATGCGCCTGCAACATATGAATATTTCTGGTCACATGGAATGATTTCTGATGAAATTGGCCTTGCTATTATGAATAATTGTGACTTTGATGATTATGTCTATGCAACTTCTCACAATGTTTCTCATTCATGCAACAATGCCATGTATGAAGCAAATCTCATTGTTGGCGATTATATAAACAACTATGATATAATTCTGGATGTTTGTTATCCATCCATAGTGGAACAAGAACTGAGATTAAAAAAGATGGCTACTAAAATGAGTTTAGGTATAGATGTTTGTATGACATTTGAAAGACGTTTTTACTTCAACCTCCCTGAGGTTCAGAAGGCTCTACATGCAAACCGGACTAATCTTCCTTATAGCTGGTCCATGTGTAGTCGTGTTCTAAACTATAGTGACACTGATGGTAACATCAACATCCTTCCAATTCTCAAAAGGATAGTCCAAAATCATATCCCAGTATGGATTTTCAGTGGAGACCAAGATTCTGTTGTGCCATTATTGGGATCTCGAACACTCATTCGCGAACTAGCCCATGAATTACAATTCAAGATTACAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTTATTAACTTTTGCCACTGTAAGGGGAGCTGCACACATGGTACCTTATGCACAACCTTCTAGAGCACTACATCTATTCAGTTCATTTGTGCGTGGAAAGAGGTTGCCTAATGCAACACGTCCTTCAATTGATGAATAA 1422 0.4142 MGRCWLVGVLIVVGCASLLGTVWVEGYPVEDLVVRLPGQPKVGFKQYAGYVDVDVKHGRSLFYYFVEAEKDPDKKSLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRINSKSWNRASNLLFVESPAGVGWSYSNTTSDYSTGDASTANDMHLFMLKWYEKFPSYRSRELFLTGESYAGHYIPQLANALLDHNARSNGFKFNIKGVAIGNPLLKLDRDAPATYEYFWSHGMISDEIGLAIMNNCDFDDYVYATSHNVSHSCNNAMYEANLIVGDYINNYDIILDVCYPSIVEQELRLKKMATKMSLGIDVCMTFERRFYFNLPEVQKALHANRTNLPYSWSMCSRVLNYSDTDGNINILPILKRIVQNHIPVWIFSGDQDSVVPLLGSRTLIRELAHELQFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVRGKRLPNATRPSIDE* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02434 473 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Rops9g02434 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Rops9g02434 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Rops9g02434 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Rops9g02434 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Rops9g02434 473 Gene3D - 361 460 - -
Rops9g02434 473 Gene3D alpha/beta hydrolase 29 290 IPR029058 -
Rops9g02434 473 FunFam Carboxypeptidase 361 460 - -
Rops9g02434 473 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Rops9g02434 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 447 IPR001563 GO:0004185|GO:0006508
Rops9g02434 473 Gene3D - 314 350 - -
Rops9g02434 473 Pfam Serine carboxypeptidase 38 460 IPR001563 GO:0004185|GO:0006508
Rops9g02434 473 FunFam Carboxypeptidase 27 291 - -
Rops9g02434 473 SUPERFAMILY alpha/beta-Hydrolases 23 466 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02434 Rops-Chr9 45182979 45188878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02434 320 463 Calmodulin-binding Proteins AT2G22960 26.389 4.41e-11 60.1