Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02422 ATGGGCAAGAATATGGGCTCCTTGTTCATTTACATAGCAGCCTTAATGATTGGAGCAATGTTCTTTGGTGTTGGAGCTGAACCAGCGAAAGATAAACATGCGTTGCTTGATTTCCTTCACAACATAAATCACTCTCATCATCTAAACTGGGATAAAACCACTTCTGTATGCAAAAGTTGGTTAGGAGTGACCTGCAACACTGACCAATCTCGAGTTATAGCCCTCCAACTCTCCAGAACAGGATTGAATGGTCCAATCCCACCTAACACACTTAGTCGCCTCTCAGCACTCCAAAGTGTGAGTCTTGCATCAAATAGTATAACTGGTTTTTTCCCTTCTAGTTTCTCTGAGCTAAAGAATTTGACCTATCTTTACCTCCAATTTAACAAATTTTCTGGTCCACTGCCATCAGATTTTTCAGTTTGGAAAAATCTCACTGTTGCCAATTTATCCAACAATTCTTTTAATGGTAGTATCCCTTTTTCAGTTTCAAATTTGACTCATCTCACTTCTTTATTCCTAGCCAACAACTCTCTTTCAGGTGAAATCCCTGATCTTAATATTCCTAGCCTGCAAGAGCTCAATTTGGCCAACAATAACCTTAGTGGGGTTGTGCCTAAATCCCTTCTGAGATTTCCAAGTTGGGTCTTTTCAGGTAATAATCTTACATCTGCATATGCACTTCCTCCTGCTTTACCTGTTCAAACCCCTGGTGCTCATCCAACAAGGAAAACCAAAGGACTTAGTGAACCAGCATTATTGGGTATAATCATTGGTGGTTGTGTGGTAGGACTTGCAGTGATAGCAGCTATTGTGATTGTATGCTGCTATGAGAAACGTGGTGAAGATGGACAACCAGGTAAGTCCCTTACAAAAGAAGTCTCTGATAAAAAAGAAGCTTCTGAAAGCAGAGAAAATAACAAAATTGTCTTCTTTGAGGGTTGCAATCTTGTGTTTGACCTGGAGGACTTGCTGAGAGCATCTGCTGAGGTGCTTGGAAAGGGTACATTTGGTACGGTATATAAGGCTGCTCTAGAGGATGCAACAACAGTGGCGGTTAAGAGGTTGAAGGATGTCACAGTTGGAAAACGCGATTTTGAACAACAAATGGAGATGGTAGGGAATATTAGGCATGACAATGTGGCTGCATTAAGAGCATATTACTATTCAAAGGAGGAGAAACTTATGGTATATGATTACTACGAACAGGGCAGTGTCTTTGCAATGTTGCATGGCAAAAGAGGAGAAGGCAGGATTTCTTTAGACTGGGATAGTCGGTTGAAAATAGCAATTGGTGCAGCAAGAGGCATTGCTCACCTCCATGCTCAACATGGAGGGAAACTCATCCATGGAAACATAAAAGCCTCAAACATCTTCATCAACTCCCAAGGATATGGTTGTTTATCAGATATTGGACTAGCAACAATGATGAGTCCAATAACCCCACCAACATTGAGAGCTGCTGGATACCGTGCAATGGAAGTAACAGAAACCCGAAAAGCCACCCCGGCATCAGATGTCTACAGTTTTGGGGTCCTACTACTTGAGCTTCTAACTGGGAAATCTCCCATGCATGCCACAGGGGGTGAAGAGGTTGTGCATTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAATGGACTGCAGAAGTGTTTGATGTAGAGTTATTGAGGTATCCAAATATAGAGGAAGAAATGGTTGAGATGCTACAAATAGGGATGGCATGTGTTGTTAGGATACCAGATCAAAGACCAAAAATTGCAGAGGTGGTGAGAATGGTAGAGGAAATTCGTCGAGTAAATAATGGAAATCGATCATCTTCAGAATCTAGATCAGAAGGAGCAATGATGTTGATCTAG 1860 0.4167 MGKNMGSLFIYIAALMIGAMFFGVGAEPAKDKHALLDFLHNINHSHHLNWDKTTSVCKSWLGVTCNTDQSRVIALQLSRTGLNGPIPPNTLSRLSALQSVSLASNSITGFFPSSFSELKNLTYLYLQFNKFSGPLPSDFSVWKNLTVANLSNNSFNGSIPFSVSNLTHLTSLFLANNSLSGEIPDLNIPSLQELNLANNNLSGVVPKSLLRFPSWVFSGNNLTSAYALPPALPVQTPGAHPTRKTKGLSEPALLGIIIGGCVVGLAVIAAIVIVCCYEKRGEDGQPGKSLTKEVSDKKEASESRENNKIVFFEGCNLVFDLEDLLRASAEVLGKGTFGTVYKAALEDATTVAVKRLKDVTVGKRDFEQQMEMVGNIRHDNVAALRAYYYSKEEKLMVYDYYEQGSVFAMLHGKRGEGRISLDWDSRLKIAIGAARGIAHLHAQHGGKLIHGNIKASNIFINSQGYGCLSDIGLATMMSPITPPTLRAAGYRAMEVTETRKATPASDVYSFGVLLLELLTGKSPMHATGGEEVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIGMACVVRIPDQRPKIAEVVRMVEEIRRVNNGNRSSSESRSEGAMMLI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02422 619 Gene3D Transferase(Phosphotransferase) domain 1 402 616 - -
Rops9g02422 619 PANTHER OS05G0588300 PROTEIN 15 609 - -
Rops9g02422 619 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Rops9g02422 619 SUPERFAMILY Protein kinase-like (PK-like) 330 595 IPR011009 -
Rops9g02422 619 ProSiteProfiles Leucine-rich repeat profile. 190 211 IPR001611 GO:0005515
Rops9g02422 619 Pfam Leucine Rich Repeat 190 210 IPR001611 GO:0005515
Rops9g02422 619 FunFam pollen receptor-like kinase 1 295 400 - -
Rops9g02422 619 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 608 - -
Rops9g02422 619 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Rops9g02422 619 Gene3D Ribonuclease Inhibitor 28 235 IPR032675 -
Rops9g02422 619 Pfam Leucine rich repeat 86 131 IPR001611 GO:0005515
Rops9g02422 619 Gene3D Phosphorylase Kinase; domain 1 291 400 - -
Rops9g02422 619 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Rops9g02422 619 SUPERFAMILY L domain-like 41 215 - -
Rops9g02422 619 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02422 619 Pfam Protein tyrosine and serine/threonine kinase 330 592 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02422 Rops-Chr9 44921758 44924878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02422 20 608 Receptor kinase-like Gene Family AT4G23740 58.472 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops9g02422 PK_Tyr_Ser-Thr 7.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02422 - - aprc:113851984 963.755