Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02420 ATGGCCACGGTTGCAGATATGAATGAAAGATTTGGACGGGAGATTCGTGTTTTTGAAACACTATCACTTTCTCCATCACATATTGCTGCACCAGAAAATGAAGAGGAGATTGATGATGACTTCTATGAGTTTGCTGCTGAAGATTATTACAGACTTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGGTCAAGAATAACCAAAGTTGTAATTAGAGTTCGCTTCCCTGATAATCACACGTTGGAGGCTACCTTTCACCCATCAGAAACAATTCAGAGTTTAATTGATCTCCTCAATAAAGTGATTGCACAACCGGAGCAGCCGTTTTATATATACGCTACTCCGCCTAAGAAGCTGATCAAAGACATGTCTCAGGATTTCTATACTGCTGGATTTTGTCCTGGTTCCATTGTGTACTTTTCATACGACGTTCCAAAAGGTGATGACAGTGTGGTTGGCCATGTTTGCCCTTACCTACTTGAAGAGGTCATGTCCTTGAAAGGTTTGAATGTTGCTAATGATCAAACTCAGCCATCAGAACCTGTAGAATCTGCAGCAGTGCCTGCTGAGGCAACACAACCTCCTGCTGCTGTTGAAGAACGTAAACCTGCTGACTTGAAGGAATGCGTTCTAAACATACATGACTTGTATCTCGGTAGGAGAGGGGGTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGCGTGGCAACAACACCCTCTCCTCCTGAGATACCTCTTTCTTTTTTCGAATTTAGAGGGACAGAACCTTAA 825 0.4218 MATVADMNERFGREIRVFETLSLSPSHIAAPENEEEIDDDFYEFAAEDYYRLLATKKEDKFLKTRKIREAEEAARRSRITKVVIRVRFPDNHTLEATFHPSETIQSLIDLLNKVIAQPEQPFYIYATPPKKLIKDMSQDFYTAGFCPGSIVYFSYDVPKGDDSVVGHVCPYLLEEVMSLKGLNVANDQTQPSEPVESAAVPAEATQPPAAVEERKPADLKECVLNIHDLYLGRRGGSLQAVREKYKQHKFKCVATTPSPPEIPLSFFEFRGTEP* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02420 274 Gene3D - 203 263 - -
Rops9g02420 274 Gene3D - 71 153 - -
Rops9g02420 274 MobiDBLite consensus disorder prediction 187 214 - -
Rops9g02420 274 Pfam Cyclin, C-terminal domain 216 258 IPR004367 -
Rops9g02420 274 SUPERFAMILY Cyclin-like 214 262 IPR036915 -
Rops9g02420 274 SUPERFAMILY Ubiquitin-like 56 153 IPR029071 -
Rops9g02420 274 Pfam UBX domain 80 148 IPR001012 GO:0005515
Rops9g02420 274 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 3 220 IPR044232 GO:0032984|GO:0051117
Rops9g02420 274 CDD UBX2_UBXN9 82 155 - -
Rops9g02420 274 ProSiteProfiles UBX domain profile. 77 153 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02420 Rops-Chr9 44849296 44850120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02420 168 268 Core Cell Cycle Gene Families AT5G43080 47.273 4.16e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02420 K15627 - gmx:100792947 291.582