Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02418 ATGGCCACGGTTGCAGATATGAATGAAAGATTTGGACGGGAGATTCGTGTTTTTGAAACACTATCACTTTCTCCATCACAAAATGCTGCACCAGACAATGAAGAGGAGATTGATGATGACTTCTATGAGTTTGCTGCTGAAGATTATTACAGACTTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGGTCAAGAATAACCAAAGTTGTAATTAGAGTTCGCTTCCCTGATAATCACACGTTGGAGGCTACCTTTCACCCATCAGAAACAATTCAGAGTTTAATTGATCTCCTCAATAAAGTGATTGCACAACCGGAGCAGCCGTTTTATATATACGCTACTCCGCCTAAGAAGCTGATCAAAGACATGTCTCAGGATTTCTATACTGCTGGATTTTGTCCTGGTTCCATTGTGTACTTTTCATACGACGTTCCAAAAGGTGATGACAGTGTGGTTGGCCATGTTTGCCCTTACCTACTTGAAGAGGTCATGTCCTTGAAAGGTTTGAATGTTGCTAATGATCAAACTCAGCCATCGAACTCAGAGAATCTGGCAGCAAAGGCTCGCCGAGGCAACACAACCTCCTCACGCTGGCCGTTGAAGAACCAGGCACAGAGGCTACATCAATCTCAGAAGTTGGAAGGGCAACCGGTTGAAATGGTACACTCGCTTCTTGTCACGAGGGCAAGCATAACTTCGTGCAGGTCTGGTGGAGCTAGGGTTGTTGAAGCTGATGAAGCACTTCCAGTTGACGATGAAGCTTTGCATGCCTTGACCCGGTTTTTTTCCGCATAG 834 0.4448 MATVADMNERFGREIRVFETLSLSPSQNAAPDNEEEIDDDFYEFAAEDYYRLLATKKEDKFLKTRKIREAEEAARRSRITKVVIRVRFPDNHTLEATFHPSETIQSLIDLLNKVIAQPEQPFYIYATPPKKLIKDMSQDFYTAGFCPGSIVYFSYDVPKGDDSVVGHVCPYLLEEVMSLKGLNVANDQTQPSNSENLAAKARRGNTTSSRWPLKNQAQRLHQSQKLEGQPVEMVHSLLVTRASITSCRSGGARVVEADEALPVDDEALHALTRFFSA* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02418 277 Gene3D - 22 152 - -
Rops9g02418 277 SUPERFAMILY Ubiquitin-like 56 153 IPR029071 -
Rops9g02418 277 Pfam UBX domain 80 148 IPR001012 GO:0005515
Rops9g02418 277 CDD UBX2_UBXN9 82 155 - -
Rops9g02418 277 ProSiteProfiles UBX domain profile. 77 153 IPR001012 GO:0005515
Rops9g02418 277 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 3 214 IPR044232 GO:0032984|GO:0051117
Rops9g02418 277 MobiDBLite consensus disorder prediction 187 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02418 Rops-Chr9 44837125 44838445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02418 9 110 C2H2 Transcription Factor Family AT2G01650 34.906 1.87e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02418 K15627 - gmx:100792947 282.337