Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02401 ATGGGGCCTTCTTACCATGCAAGGGAGAAGGGAATTGATTATATCTATCCTGGTTCAGTTAAGAGTGTAGACAAGTCTTGTAATGTACTATTGCTTGAGGTTGAACCCGGGCAACAGAGAAGTGTTGGTACTTTGTTGCAGAGTAAAAGTTTTATGCACCAATCGAGAGTGGAGTTATCAAGGAAGGTTTGTAGGTCAAATAGTGATGTTTCTAGGTCACAAACACAAGGTGATGAGGCGGCAGACAACCCTTGTTTTCCATCACGCTTCTCATCCATGGAGCAGAAGTCCAACACTAATCTGGATGCTCTTGTTTTCTACTGCCCCATTGTTGAGAGGCTCACAAACTCTCTCATGATGCACGGTAGAAACAATGGCAAGAAACTTATGGCTGTTAGGGTCATCAAGCATGCTAGGGAAATTATTCATTTACTGACTGACCAGAACCCAATTCAGGTTATTGTTGATGTTGTCATCAACAGTGTTCCACGTGAAGATGCAACTCGAATTGGTTCTGCTGGAGTTGCTAGGAGACCAGCTGTGGATATCTCACCCCTGCGTTGTGTTAATCAAGCCACCTGA 582 0.4399 MGPSYHAREKGIDYIYPGSVKSVDKSCNVLLLEVEPGQQRSVGTLLQSKSFMHQSRVELSRKVCRSNSDVSRSQTQGDEAADNPCFPSRFSSMEQKSNTNLDALVFYCPIVERLTNSLMMHGRNNGKKLMAVRVIKHAREIIHLLTDQNPIQVIVDVVINSVPREDATRIGSAGVARRPAVDISPLRCVNQAT* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02401 193 Gene3D Ribosomal protein S7 domain 89 193 IPR036823 -
Rops9g02401 193 Pfam Ribosomal protein S7p/S5e 97 192 IPR023798 -
Rops9g02401 193 ProSitePatterns Ribosomal protein S7 signature. 112 138 IPR020606 GO:0003723|GO:0003735|GO:0006412
Rops9g02401 193 PANTHER RIBOSOMAL PROTEIN S7 104 192 IPR000235 GO:0006412
Rops9g02401 193 SUPERFAMILY Ribosomal protein S7 96 192 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02401 Rops-Chr9 44293385 44294437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02401 108 192 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 84.706 4.15e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02401 K02989 - gmx:100499758 154.451