Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02390 ATGGAGTGCAACAAAGATGAGGCAGCTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATGCTGGCGCAAAAAAGTTTGCCCTCAAGGCTCTAAATTTGTATCCTGCACTGGAGGATCTTTCTCAGTTTCTGACAACTCTTGATGTTTATATCTCGGCTGAGAATAAAATAAATGGAGAAATGGATTGGTATGGTATACTTGGAGTTAATCCCTTTGCTGATGATGAGACAATTAGAAAGCAGTACAGGAAGTTGGTTCTCACTCTTCACCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGCATGGAGTTTACTATCAGATAAGGTCAAGAGACTAGCATATAACCAGAACAGGAGTTCGGAAGGATTTCAGCATAATGCTGCCAACCACGTTGGGTCTCAATTCGAAGCACCCAGTTCAAATGGTTTTTATAATATTAACAAGAATGCAACGGCAAATGCAAGAACTGGAAATGGTAAAGCTCGAGCACCTTCAACCTCCGTTCCTCCTCCGCATAAAATGGCTGGTACCTTTTGGACCATATGTAATCGGTGCAGGACACATTTTGAGTATCTCAGGATTTATTTGAATCATACCCTTTTATGTACCAATTGTAATGAAGCTTTTGTGGCTATAGAGAGGGGTCCGCCTCCTAATGTTGTTAAGTCACCTAATTGGTCTTCTCGGCAACATCCTCAGAAGTCTAGACATCATGCTGGAAAGAATCACCCTGTGAATCCAGGAGGAACTTGTTCAGTTTCTCAAAACACTGAATCCAGCAGTTCTACAGGCAGGTCTTCTTTTAATAATACAAACTTCCAGTGGGGTCCTCACTCGAGAATGGCTGGTTTTGTTAGTGCAGACGGATCATCATCTGTTGCTGCTGCTAGTGTTAAGCAGCAGTCAAGCAAGAAAAGGAGAGAATCTGAGGGAGCCCCATCAATTGCTGCATGGGAGAGGAGTCACATGTATAAGCGGTCTGATGGTTCTTTTAGTAGTGTTGAGAAACCTATGAAAAAAATGAGGAAAGATGGTATTCACTTGAACACGGTAAATCATATGACCATGGGGGATGGAGCAACCGGTTTGGGCTGTTTTTATGAATCAGGAAAGGCTAAAATGGGAACAGAAAGGACTTATGGTTTTTCTGGTATTACTAGCAAGCACTACAGCATGAGAGAGTTGTCAGTGTTTGAAATACGGAACATGTTGATCAATAAAGCACAGATTGAAATTCGCAAGAAAGTTCAAGAATGGAGATCAATGGCTGAAGCTAAGGCTGCAAACAAGGACAAAGGAAATAAGAGGCAGAAAAGCACATTTGATGACAAAACAAATGGTCCAGAGAAGAATGGAGATTCCATTATTAATGGCAACAGGCATGTGGACAGCAATTCTATCCCAGTCACATCTGATGACTCTGTAAAGGAGAACCAAGCCTATGTTACAATCAATGTTCCAGATCCTGATTTTCACAATTTTGACTCAGATAGAACTGAAAATTCCTTTGAGGAGGATCAGGTCTGGGCTGCTTACGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCAACGAATCCATTTAGAATGCGAATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATGGATTGGGTAGGTTCTGGTTTTTACAAAACATGTGGGGATTTCAGGACTGGCAGGCATGAAATAACCGAATCATTAAATTCATTTTCACATAAGGTAAGGTGGACAAAAGGCACCAGAGGAGTTGTTCACATCTATCCTGGAAAGGGGGAAGTCTGGGCACTATACAAAAGCTGGTCTCCTGATTGGAATGAAAATACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAACGAGGAGGAAGGTGTGTTAGTGACGCCACTTGTTAAGGTTGATGGTTTTAGGACAGTGTTTCAAAGGCACAGCCATGATCAGGTAAGGAAGATTCCTAAAGTGGAGATGTTTCGCTTCTCTCATCAGGTTCCTAATTACTTGCTTACGGGGCAAGAAGCTCATAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCAGCAACCCCTTTAGACCTCCTTCAGACAATGACAGAAGCCAATGAGGCATTTGATAATGTTGCAAAATCTAAGGAAGACAAATTGCCCAGTTCACCTGAAAAACATGCTTCTGGTAAGGCAGAGAATGCTTCAAAACCTAGTAGAGCAGATATGTTAGATGAGGATGGTAAACAGAAAAAGGATGATAGATGA 2334 0.419 MECNKDEAARAKEIAERKFSEREYAGAKKFALKALNLYPALEDLSQFLTTLDVYISAENKINGEMDWYGILGVNPFADDETIRKQYRKLVLTLHPDKNKSLGAEGAFKLVSEAWSLLSDKVKRLAYNQNRSSEGFQHNAANHVGSQFEAPSSNGFYNINKNATANARTGNGKARAPSTSVPPPHKMAGTFWTICNRCRTHFEYLRIYLNHTLLCTNCNEAFVAIERGPPPNVVKSPNWSSRQHPQKSRHHAGKNHPVNPGGTCSVSQNTESSSSTGRSSFNNTNFQWGPHSRMAGFVSADGSSSVAAASVKQQSSKKRRESEGAPSIAAWERSHMYKRSDGSFSSVEKPMKKMRKDGIHLNTVNHMTMGDGATGLGCFYESGKAKMGTERTYGFSGITSKHYSMRELSVFEIRNMLINKAQIEIRKKVQEWRSMAEAKAANKDKGNKRQKSTFDDKTNGPEKNGDSIINGNRHVDSNSIPVTSDDSVKENQAYVTINVPDPDFHNFDSDRTENSFEEDQVWAAYDDDDGMPRYYARIHKVISTNPFRMRISWLNSRSNSELGPMDWVGSGFYKTCGDFRTGRHEITESLNSFSHKVRWTKGTRGVVHIYPGKGEVWALYKSWSPDWNENTPDEVIHKYDMVEVLEDFNEEEGVLVTPLVKVDGFRTVFQRHSHDQVRKIPKVEMFRFSHQVPNYLLTGQEAHNAPKGCRELDPAATPLDLLQTMTEANEAFDNVAKSKEDKLPSSPEKHASGKAENASKPSRADMLDEDGKQKKDDR* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02390 777 MobiDBLite consensus disorder prediction 462 485 - -
Rops9g02390 777 MobiDBLite consensus disorder prediction 435 461 - -
Rops9g02390 777 Gene3D DnaJ domain 63 174 IPR036869 -
Rops9g02390 777 PRINTS DnaJ domain signature 86 101 IPR001623 -
Rops9g02390 777 PRINTS DnaJ domain signature 68 86 IPR001623 -
Rops9g02390 777 PRINTS DnaJ domain signature 102 122 IPR001623 -
Rops9g02390 777 MobiDBLite consensus disorder prediction 732 777 - -
Rops9g02390 777 MobiDBLite consensus disorder prediction 259 286 - -
Rops9g02390 777 PANTHER BNAC03G44070D PROTEIN 1 717 - -
Rops9g02390 777 MobiDBLite consensus disorder prediction 435 485 - -
Rops9g02390 777 SMART dnaj_3 65 122 IPR001623 -
Rops9g02390 777 Pfam Domain of unknown function (DUF3444) 495 700 IPR024593 -
Rops9g02390 777 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Rops9g02390 777 Pfam DnaJ domain 66 127 IPR001623 -
Rops9g02390 777 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Rops9g02390 777 SUPERFAMILY Chaperone J-domain 57 126 IPR036869 -
Rops9g02390 777 CDD DnaJ 66 119 IPR001623 -
Rops9g02390 777 MobiDBLite consensus disorder prediction 730 777 - -
Rops9g02390 777 MobiDBLite consensus disorder prediction 307 331 - -
Rops9g02390 777 MobiDBLite consensus disorder prediction 226 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02390 Rops-Chr9 44099335 44104026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02390 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.906 4.23e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02390 - - gmx:100799958 1176