Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02384 ATGCAAAAAACGACGATGAAAAATCTAAAACGCCACTCGCCGACGACGATGAAAAATCTAAAACGCCACTCGCCGCCGGATTCTTCTCTCCGGCGAGTGGTCCTCGACGAGACGGTTACCGGGTTCAAGAATGCTCGCCGGAGGAGGTTGAAAATCCGGCGAATGAAGTACAGCTGCCAGGAGATCCACGTCGGAAATGGCTCCGACGGCGGAGATAATCCACCGGAGGAGATGAAGGTAGAGGAAAAGCGAAGAGAGATTCACGAATCGCTGGAGATATCGCTGTCGCTGGCGTCGTCGTCGTCATCGGAGGAGGAGGATCGGTCGTCGAAGAGAAACGACGCCGTTTTGTCGTACGGTTCGGTTTCGGTTATAGGTTCCAGGAAGGAGATGGAGGACTCGGTGAGTGTGGAGAGAGGGTTTGTGATGAAGGAGAGAGCGAAGTGTGATTTCTTCGCGGTTTACGACGGTCACGGCGGAGCTCAGGTGGCGGAGGCGTGCCGGGAGCGGTTGCACCGGCTGGTGGCGGAGGAGGTGGAGAGATACCGGAATGAGGGGGAATGGGACTGGGAGAGAGTGATGGAAGGGTGTTTTCGTAAAATGGATAGTGAGGTGGCAGATAATGCGGCGGTTAGGACAGTCGGTTCCACCGCGGTTGTCGCCGTTGTGGCGGCGACGGAGGTGATCGTCGCTAATTGTGGTGATTGTAGGGCCGTGATGGGAAGAGGAGGTGAAGCCGTGGACTTATCTCGTGATCACAAGCCCTACAGGCCTGATGAGTTGATGCGAATCGAAGAAGTTGGTGGAAGGGTCATAAACTGGAATGGCCACCGAGTTCTGGGTGTTCTTGCCACTTCAAGATCTATAGGAGATCAATACCTTCGACCATATGTAATATCAAAACCAGAAGTCACAATAACCAAGCGAACCAGCAAAGATGAGTTTCTCATACTAGCAAGTGATGGCTTGTGGGATGTCATATCCAGTGAAGTTGCATGCCAAGTTGTAAGGAAATGCCTCAACGGCCGGATTAGGAGAGTTTGCCATGGAGTTGGAAATCAAAGCCGTGCTGCCGAGGCTGCAGCACTCTTGGCTGAGATAGCATTGGCAAAGGGAAGCAGAGATAACACCAGTGTCATAGTAATCGATCTAAGAGGAACAGTAACATCTAGTTGA 1176 0.5247 MQKTTMKNLKRHSPTTMKNLKRHSPPDSSLRRVVLDETVTGFKNARRRRLKIRRMKYSCQEIHVGNGSDGGDNPPEEMKVEEKRREIHESLEISLSLASSSSSEEEDRSSKRNDAVLSYGSVSVIGSRKEMEDSVSVERGFVMKERAKCDFFAVYDGHGGAQVAEACRERLHRLVAEEVERYRNEGEWDWERVMEGCFRKMDSEVADNAAVRTVGSTAVVAVVAATEVIVANCGDCRAVMGRGGEAVDLSRDHKPYRPDELMRIEEVGGRVINWNGHRVLGVLATSRSIGDQYLRPYVISKPEVTITKRTSKDEFLILASDGLWDVISSEVACQVVRKCLNGRIRRVCHGVGNQSRAAEAAALLAEIALAKGSRDNTSVIVIDLRGTVTSS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02384 391 MobiDBLite consensus disorder prediction 74 91 - -
Rops9g02384 391 Pfam Protein phosphatase 2C 119 377 IPR001932 -
Rops9g02384 391 MobiDBLite consensus disorder prediction 62 113 - -
Rops9g02384 391 CDD PP2Cc 118 384 IPR001932 -
Rops9g02384 391 ProSiteProfiles PPM-type phosphatase domain profile. 118 384 IPR001932 -
Rops9g02384 391 PANTHER PROTEIN PHOSPHATASE 102 384 IPR015655 GO:0004722|GO:0006470
Rops9g02384 391 SMART PP2C_4 108 382 IPR001932 -
Rops9g02384 391 FunFam Protein phosphatase 2C 51 111 391 - -
Rops9g02384 391 Gene3D - 110 388 IPR036457 -
Rops9g02384 391 SUPERFAMILY PP2C-like 113 385 IPR036457 -
Rops9g02384 391 MobiDBLite consensus disorder prediction 1 23 - -
Rops9g02384 391 MobiDBLite consensus disorder prediction 1 30 - -
Rops9g02384 391 ProSitePatterns PPM-type phosphatase domain signature. 151 159 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02384 Rops-Chr9 43966156 43969157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02384 108 385 PP2C-type Phosphatase Gene Family AT1G07430 46.341 1.24e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02384 K14497 - gmx:100807235 488.419