Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02382 ATGTTGGATAATTACTCTAGACTAGTTCTGCCATTCTTTTGCTTCCTTTTTGCTTTGAACTACTGCACTAAGCTTGCTTCTGCTGACATTGGCTGCATAGAAACAAGGTGCAGTTACCATGCTCCTTCTATTCAGTACCCTTTCCAACTCAAAGACAGACAACCACAAAAGTGTGGTAAAACTGGGTTTAATCTTTCATGCAATGAGAATCAACAAACCATACTAGAGTTGCCAGTTTCAGTAAAACTTTTAGTCAATAAAATTGATTACAAGTCCCAAATGATTCATGTCACCGACCCAGATTGGTGCTTCCCAAGACTCCTCTCACATCTCAATTTATCTTCCACTCCTTTTCACTACCTTCAAAATTCCAATGCCAACTACACCTTATTCAATTGTTCATACATGAACACTGCTTTACAATCTTCTTATTCTTCCATCCCTTGCCTTTCTGCTCCTGGATACCAAGTTTATGCTTTGAACTCCACACTTCACATCAAGGATGTTACCCTGTCATTTTGTACTAAGTTGTATGACATAAAATCGGTTCCTATTGATGTTTTTAACCAGCAGGATGATCTAATTTTAAGCTGGGATGAAAGCTGTGGCAATGAAACAGAACATGGATGTTACAATGTTGTCCACAAATCCAAAGGTGCAAGGAAAAAAGTGGAGATTCTAGGTGATACTTCCTAA 696 0.3836 MLDNYSRLVLPFFCFLFALNYCTKLASADIGCIETRCSYHAPSIQYPFQLKDRQPQKCGKTGFNLSCNENQQTILELPVSVKLLVNKIDYKSQMIHVTDPDWCFPRLLSHLNLSSTPFHYLQNSNANYTLFNCSYMNTALQSSYSSIPCLSAPGYQVYALNSTLHIKDVTLSFCTKLYDIKSVPIDVFNQQDDLILSWDESCGNETEHGCYNVVHKSKGARKKVEILGDTS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02382 231 Pfam Wall-associated receptor kinase galacturonan-binding 32 99 IPR025287 GO:0030247
Rops9g02382 231 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 210 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02382 Rops-Chr9 43953145 43954050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02382 26 150 C3H Transcription Factor Family AT2G25410 36.800 1.38e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02382 - - lja:Lj0g3v0275219.1 340.887