Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02380 ATGATGCGCATCCTGGTTTCCAACACAGGGATGTGGCAGGTTAATGGTTGTAGGGACAGTGATTTGAGGTGCGGACGTCACGGCCCGCTCATCCGATTTCCCTTCCGATTTAAAGACAGGGAGCCAGATGGCTGTGGTTATAGGTTTGATCTATCTTGTTCAGATAAACACCAGACCCTGCTTGAGCTGCCTGCACTTCCATTTAAACTCCAAGCCACAACCATAGACTATCGACAACAGCTTTTATACGTATCTGACCCCGAAAATTGCCTTCCAAATAAGTTATCAAAGCTCAATCAATCGTCAATTTCTCCATTTCTATTTGGGTCATCCGAATCATTTAACATCACTGTCCTTAATTGCAGTTCAGTTGTTATGCAATATCAATTCCAGCCACAGGCAATGTTTTCCTGTCCCATTTATGCTGTTTTCTCTTTCGATTCAGTCTTTTATTCGCACCTAAAATTCTGCACCAAGATGTTCGACGTTTCTTCAACCCTGGACCCATACGTCGTGGAAAGTAATAGTTTTCTACTGCAATGGTCGAAACCAAATTGTAGCAAGTGTGAAACAGAAGGCAAGATGTGTAAACTTAAGAACAACGGCACTGACGATGATATTGAATGTTTTGACCGTTATCACAAACCAATAAAGAAGATACTTTTATATGTCACAGCTGTGTTCTTTGGTTCAATTCTTGTGATGCTCATGTTTAAAATGTGTGCGCAATGGATTCACAATCTGCTTGAAGGACGAGATATGCATGTACCTATTGAGGGACAGGGAGATACTACAATTGTAAAGAAGCTTGCAATTGTGGGACTTTGGTGCATTCAGTGGCACCCAGTAAACCGTCCATCAATAAAAGCTGTGCTCCAAATGTTGGAGGCTCCAGAGGAAGGAAAATTAACAGTGCCACCAAACCCTTTTGATTCGACAACTTCCAAAGGTAGTACGGTGTTGCCAAAATATTCAAGCCTGGAGTTGGAAGTTATACATGAATGA 1005 0.4189 MMRILVSNTGMWQVNGCRDSDLRCGRHGPLIRFPFRFKDREPDGCGYRFDLSCSDKHQTLLELPALPFKLQATTIDYRQQLLYVSDPENCLPNKLSKLNQSSISPFLFGSSESFNITVLNCSSVVMQYQFQPQAMFSCPIYAVFSFDSVFYSHLKFCTKMFDVSSTLDPYVVESNSFLLQWSKPNCSKCETEGKMCKLKNNGTDDDIECFDRYHKPIKKILLYVTAVFFGSILVMLMFKMCAQWIHNLLEGRDMHVPIEGQGDTTIVKKLAIVGLWCIQWHPVNRPSIKAVLQMLEAPEEGKLTVPPNPFDSTTSKGSTVLPKYSSLELEVIHE* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02380 334 Pfam Wall-associated receptor kinase galacturonan-binding 17 86 IPR025287 GO:0030247
Rops9g02380 334 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 15 244 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02380 Rops-Chr9 43896912 43898856 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02380 24 275 C3H Transcription Factor Family AT2G25410 27.273 2.72e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02380 - - ahf:112783902 199.519