Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02375 ATGCTCATCCTTGTTTCCAGCACAGGGATCTGGCAGGTTAATGGTTGTAGGGACAGGGATTTGAGGTGTGGACGTCACGGCCCACGCATACGATTTCCCTTCCGATTTAAAGACAGAGAGCCAGATGGCTGTGGTTATAGGTTTGATCTCACTTGTTCAGATGATCACCAGACGCTGCTTGAGCTCCCCGCACTTCCATTTAAACTCCAAGTCACAGACATAGATTATCAACAACAGCTTTTATACGTATCTGACCCCGAAAATTGCCTTATAAATAAGTCATCAAAGCTCACTCAATCATCAATATCTCCCTTTCAATTTTTTTCATCCTCTAATCATACCATCACTGCCCTCAATTGCAGTTCAGTTGTTATGCAATATCGATTCCATCCGCAGGCCACGTCTTCCTGCCCGAATTATGCAGTTGGCTCTTCCCAATCAATCCTTGATGATCCTGACCTAATAATATTCTGCACCAAGATGTTCGACGTTTCTTCAACCATGGACCTAAACGAACTGCAGTGGAATAATGATCTTGTATTGCAATGGTCGAAACCAAATTGTAGCAAGTGTGAAACAGAAGGCATGATGTGTAAACTGAAGAACAACGGCACTGAAGACGACATTGAATGTTTTGACCGTTATCACAAACCAATAAAGAAGATACTTTTATATGTCACAGTTGTGTTCGGAGATACTACAATTGTAAAGAAGCTTGCAATTGTGGGACTTTGGTGCATTCAGTGGCACCCAGTAAACCGTCCATCAATAAAAGCTGTGCTCCAAATGTTGGAGGCTTCAGAGGAAGGCAAATTAACGGTGCCACCAAACCCTTTTGATTCGACAACTTCCAAAGGTAGCACCATGCTGCCAAAATATTCAAGCTTGGAGTTGGAAGTTATACATGAATGA 912 0.4254 MLILVSSTGIWQVNGCRDRDLRCGRHGPRIRFPFRFKDREPDGCGYRFDLTCSDDHQTLLELPALPFKLQVTDIDYQQQLLYVSDPENCLINKSSKLTQSSISPFQFFSSSNHTITALNCSSVVMQYRFHPQATSSCPNYAVGSSQSILDDPDLIIFCTKMFDVSSTMDLNELQWNNDLVLQWSKPNCSKCETEGMMCKLKNNGTEDDIECFDRYHKPIKKILLYVTVVFGDTTIVKKLAIVGLWCIQWHPVNRPSIKAVLQMLEASEEGKLTVPPNPFDSTTSKGSTMLPKYSSLELEVIHE* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02375 303 Pfam Wall-associated receptor kinase galacturonan-binding 16 85 IPR025287 GO:0030247
Rops9g02375 303 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 248 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02375 Rops-Chr9 43759434 43761467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02375 23 267 C3H Transcription Factor Family AT2G25410 29.259 5.62e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02375 - - ahf:112783872 182.57