Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02372 ATGATGCTCATCCTTGTTTCCAGCACAGGGATGTGGCAGGTTAATGGTTGTAGGGACAGGGATTTGAGGTGCGGACGTCACGGCCCGCGCATCCGATTTCCCTTCCGATTTAAAGACACAGGGCAAGATGGCTGTGGTTATAGGTTTGATCTCACTTGTTCAGATAATCACCAGACGCTGCTTGAGCTGCCTGCACTTCCATTTAAACTCCAAGTCACAGACATAGATTATCAATACCAGATCTTACGGGTCTCTGACCCTGAAAATTGCCTTATAAATAATTCAGTTTTACCACAGGCCACGTCTTCCTGCCCGAATTATGCAGTTGACTCTTCCCACTCAGTCCTTGATCCAGAACTAACATTCTACTCAGTCCCTGATCCCGACCTAACATTCTGCAACAAGATGTTCGACGTTTCTTCACCCCTGGACACATACGACCTGCTACGTAATAGTTTTACACTGCAATGGTCGAAACCAAATTGTAGCAAGTGTGAAACAGAAGGCATGATGTGTAAACTGAAGAACAACGGCACTGAAGACGACATCGAATGTTTTGACCGTTATCACAAACCAATAAAGAAGATACTTTTATATGTCACAGCTGTGTTCGTTGGTTCCATTTTGTGGCACCCAGTAAACCGTCCATCCATAAAAGCTGTGCTCCAAATGTTGGAGGCTCCAGAGGAAGGCAAATTAACAGTGCCACCAAATCCTTTTGATTCGACAACTTCCAAAGAAAAGTCGCGTTTCCTCATTTTGTTCTCCCTCATCGTGTTCCCCTCATCCCTCTCTTGGAGAAACGACGCAACCTTGCACAGAGCCCTACCTCCATCAACTCCATCTCTGATTTCTCCAACAGATCATATGGAATATGCATGTTCATCTACCTCCAGTTCTGATGATGAACTGGACAATGAAATGATGGATGTTATGATGATTTCATTTATATTGGATAATGTTCCAATAGATAAAATTACATGTAGGACTTCTATGTTATCAGGAAAGGAGTATATTCAAGAGGTCCTACTTGGAAATCCAACGAGATGTTATGAGTGTTTTAGAATGAAACCTCATATATTTAAAAACTTGTGTGCTAGGCTTAAAATGATGGGACTTATACGAGACTTTAGGAATATTAGTGCAGAAGAAGGATTAGCAATAGGTGTGGGAATTTTATGTCATGGCACTACTCAAAGAATAGTAGCAGAAAGGTTTCAGCATTCTACTTGTACTGTGCATAAATGGTTTAAAATTGTGATTAGAGCATTAACAACTCTGGGTAATGAGTTGATTAAGCCAATTGATAGAGGTGCAATTCAACCTGAAATTCTCGATAATCCAAAATATTATCCGTATTTTGAGAAATGTGTTGGTGCTATTGATGGTACTCATGTAGCAGCTTGGTCGCCAGCTTCTAAACAAAAAACTTTTCGTGGTAGAAAAGCACAACTCATAACACAAAATATCATGGCTGCATGTTCCCATGATATGATGTTTACTTTTGTTTATACTGGGTGGGAAGGAACTGCAAATGATTCTCGTATTTTTATTGATGCCGTATCGAGGGAGGAAAGTGGATTTCCAAAACCGGCCGAAGGTTACTACTATGTAGTAGATGTTGGCTATCCAAATATTCCTGGATTTTTGGCTCCATATCGTGGTGAGAGATATCACTTGAATGATTTCCAAGGTTGTGGTCGAATTACAGGGAAATGCGATTTGTTTAATTATAGACACTCGTCCTTGCGCAATGTGATAGAAAGATGTTTTGGTGTTTTGAAAGCAAGATTTCACATTTTAAAGTCAATTCCAAATTATCCTTTGAGGCGTCAAAGATTAATTCCTTTAGCTTGTTGCACATTACATAATTTTATCAGGAATGAAGATAGGCTTGACAGGTTGTTCACTTTGTATGGTGAAGATGGCTTACAGGTATCAGATGAGAATGGATTAGGTGAGCAAGAATTTATTGAAGTGGACATGACAGCACAGGCACAAATGAGTGCTTTCAGGGAAGAAATTGCAGAAAAGATATGGAGTGATTATGTCAGACATAGAACAAACTAA 2070 0.4005 MMLILVSSTGMWQVNGCRDRDLRCGRHGPRIRFPFRFKDTGQDGCGYRFDLTCSDNHQTLLELPALPFKLQVTDIDYQYQILRVSDPENCLINNSVLPQATSSCPNYAVDSSHSVLDPELTFYSVPDPDLTFCNKMFDVSSPLDTYDLLRNSFTLQWSKPNCSKCETEGMMCKLKNNGTEDDIECFDRYHKPIKKILLYVTAVFVGSILWHPVNRPSIKAVLQMLEAPEEGKLTVPPNPFDSTTSKEKSRFLILFSLIVFPSSLSWRNDATLHRALPPSTPSLISPTDHMEYACSSTSSSDDELDNEMMDVMMISFILDNVPIDKITCRTSMLSGKEYIQEVLLGNPTRCYECFRMKPHIFKNLCARLKMMGLIRDFRNISAEEGLAIGVGILCHGTTQRIVAERFQHSTCTVHKWFKIVIRALTTLGNELIKPIDRGAIQPEILDNPKYYPYFEKCVGAIDGTHVAAWSPASKQKTFRGRKAQLITQNIMAACSHDMMFTFVYTGWEGTANDSRIFIDAVSREESGFPKPAEGYYYVVDVGYPNIPGFLAPYRGERYHLNDFQGCGRITGKCDLFNYRHSSLRNVIERCFGVLKARFHILKSIPNYPLRRQRLIPLACCTLHNFIRNEDRLDRLFTLYGEDGLQVSDENGLGEQEFIEVDMTAQAQMSAFREEIAEKIWSDYVRHRTN* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02372 689 Pfam DDE superfamily endonuclease 461 624 IPR027806 -
Rops9g02372 689 Pfam Wall-associated receptor kinase galacturonan-binding 17 86 IPR025287 GO:0030247
Rops9g02372 689 PANTHER UNCHARACTERIZED 296 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02372 Rops-Chr9 43644923 43662879 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02372 24 186 C3H Transcription Factor Family AT2G46495 28.788 6.50e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02372 - - ecad:122610334 503.827