Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02371 ATGCCTGACAAATTTGAAAAGATTGTGAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCTGGTAAATGGGTTGTTACAAAGTTTGTAAAGGAGCACGCACATCCTCTGACTCTTGGAAAAGGTAGAAGGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCAAGAACTATCTCAGCAGTTGGCAATAGAGAAAAAGCGATCTGTGACTTATAAGAGACATCTTGAATTGTTATTTGATTACATCGAGGAGCATAATGAGACCCTTTCAAAGAAAATACAGCACATAGTAGACGGTGTGAAGGAGATGGAAACCAAAGAACAAAATAGCCATTGA 375 0.3867 MPDKFEKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHAHPLTLGKGRRDCIYEQYPNEHDKIQELSQQLAIEKKRSVTYKRHLELLFDYIEEHNETLSKKIQHIVDGVKEMETKEQNSH* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02371 124 Pfam FAR1 DNA-binding domain 7 47 IPR004330 -
Rops9g02371 124 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02371 Rops-Chr9 43637373 43638315 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops9g02371 FAR1 2.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02371 - - gmx:100806900 224.172