Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02345 ATGTTTGCAGAGACTGGTCTTCTCTTCCCATACTTGCAGGATTTCTCTCAAGAGTTTCAACAACTTGAGGAGTACTGCATGACCCAGAAGTCCAATGCTTTAATGAGTGACCTTGCTCAATCTTCTGCAATGTCAGAATATGATTTGTTAGTCGAGGGAGACCTGTTCAAAGCACCTGAACCTATAGTTGTAGAACCAGCCATGGACCTGGATCCCGTGCAAGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTCTCCTCACAGGGTTTGAAATCCTCAGATATTGGTGCACTTCAAAATGAACAGCTTTTGAGTGAGGTATACTATGAATGCAAAAAAGATCTCTTAGAAAAGGCAGCGATAGAGTCGCCACTCTCTGAAATTCTGGAAATGAAGATTCCAGCTTTGAACATAGATGATAATTTAATTCAAGAAAACAAACCATTTCCTGACATACCATTACCAAAGAGTGTCAGTTCTGGAAGTTTGAGTTCAATGGACAGGATGCATGGAGCTACAATGAAGCCTGCATTCCTTGATTTCCCTGGAATAGATTTCAATGCTGATTATGGCATGCGAAGAGCATTCAGCGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACGTTTGTCAATCTCCCCTTGAGAGGCCTTTTCTTCTCTGCAACTGCACTAGCGAGGAACGCCGAGAAAAGCTCTCCAGATATAGGAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCACGAATCCGTGGAAGATTTGCAAAGACAGAAGAATTTGATGCAAGAGGCAATAACTGTTAA 852 0.419 MFAETGLLFPYLQDFSQEFQQLEEYCMTQKSNALMSDLAQSSAMSEYDLLVEGDLFKAPEPIVVEPAMDLDPVQAAISMISCGEDVSSQGLKSSDIGALQNEQLLSEVYYECKKDLLEKAAIESPLSEILEMKIPALNIDDNLIQENKPFPDIPLPKSVSSGSLSSMDRMHGATMKPAFLDFPGIDFNADYGMRRAFSEGDIKTLGNGNMNVCQSPLERPFLLCNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDARGNNC* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02345 283 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Rops9g02345 283 Pfam CCT motif 231 273 IPR010402 GO:0005515
Rops9g02345 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 165 275 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02345 Rops-Chr9 43186333 43190963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02345 230 281 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 1.52e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops9g02345 CCT 7.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02345 - - aprc:113853022 456.832