Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02334 ATGATGACCAATAATGATGCTACACCTTTGGAGATTCCAATTCCAATTCCAAGCTATTATAAAGTTAAGGTACACCGCTCAATATGCATAGAGCTTCATGGATTCATTGATAGAATTTTGCATATAATATTAGCCATCGAGTCTGCCCGACCAAATTGTGCGTTAGCAATGCAGGCATTGTGCTCATTACACTTCACTTTGGATAAAGCCAAGTCAATTATCAAACACTGTTCTGATTCCAGTAAACTCTACCTGGCAATCACATCACACAAGATACTTTCAAGATGTGAAAAAATACGAAATGCTTTTGAGTTGTACTTGGCTCAGATTCAAAATGCTGTTCCAATACCATTGGCTACTGAGATATCTGCAATGCTACAAGATCTTAGGGATATAGAATTTTACTGTCACTGCTTGAGAAGAACTTGCCTGATTCAGCTTCTATGGAGAATGCAGAAGTTGAAGCTATTCAAATTGCAACTTCAAGACCCACTTTGCTTCAGTTGTAACAAAATCTCACAAGGATTCTGCAGCACTTCCGAATGGAATCTTCTGATAGTTGCTTCCCCAAACACATGCCATATTGCTACCTCCATCCTCGCTTCTATGGCATGTGGTATGGGATCAGGACTTGCAACAGTTAATAATATGGGTCAAATAGGTGAATCCCTTGGTTATACCAGTCATGAGACAAGTTCCTTGGTTGCTTTATGGAGCATTTGGAATTTTCTTGGCCGTGTTGGAGCTGGTTATGTTTCAGATTATTTTTTGCACACAAGGGGATGGGCAAGACCTTTATTTATGGTCATCACTTTGATGATCATGAGCATTGGCCTTGTGGTGATTGCTTCTGGAATGCCAAGTGCTCTATATGTTGGTTCAATATTGGTGGGTATTTGTTATGGTTCTCAGTGGTCCCTAATGCCCACAATCACTTCTGAGATATTTGGAGTGAGACATATGGGTAGCATATTCAACACCATTACTATAGCAAGTCCAGTGGGATCTTATATATTTTCTGTAAGAGTAGTTGGGTATATATATGATAAAGAAGCATCAGAAGGAGACACTTGCATTGGAACTCATTGTTTTATGTTTCCTTTTCTCATAATGGCATGTGCCACTATTTTGGGTTCTTTGACAGCTTTAGGTACATGTGTGACAGGTGTTGGCCAAATGAGAAGGTAG 1188 0.3948 MMTNNDATPLEIPIPIPSYYKVKVHRSICIELHGFIDRILHIILAIESARPNCALAMQALCSLHFTLDKAKSIIKHCSDSSKLYLAITSHKILSRCEKIRNAFELYLAQIQNAVPIPLATEISAMLQDLRDIEFYCHCLRRTCLIQLLWRMQKLKLFKLQLQDPLCFSCNKISQGFCSTSEWNLLIVASPNTCHIATSILASMACGMGSGLATVNNMGQIGESLGYTSHETSSLVALWSIWNFLGRVGAGYVSDYFLHTRGWARPLFMVITLMIMSIGLVVIASGMPSALYVGSILVGICYGSQWSLMPTITSEIFGVRHMGSIFNTITIASPVGSYIFSVRVVGYIYDKEASEGDTCIGTHCFMFPFLIMACATILGSLTALGTCVTGVGQMRR* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02334 395 SUPERFAMILY MFS general substrate transporter 198 383 IPR036259 -
Rops9g02334 395 CDD MLKL_NTD 21 133 - -
Rops9g02334 395 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 200 383 - -
Rops9g02334 395 Gene3D - 16 115 IPR036537 GO:0007166
Rops9g02334 395 Gene3D MFS general substrate transporter like domains 182 387 IPR036259 -
Rops9g02334 395 ProSiteProfiles Major facilitator superfamily (MFS) profile. 194 395 IPR020846 GO:0022857
Rops9g02334 395 Pfam Major Facilitator Superfamily 200 380 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02334 Rops-Chr9 42845257 42850826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02334 202 383 Nodulin-like Gene Family AT1G74780 67.760 8.59e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02334 - - lja:Lj1g3v0437880.2 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02334 9 42845257 42850826 Rops9g02334 9 42845257 42850826 ECH