Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02329 ATGGAGGGAGAGGAGGTCGGAGCACTTGGATCGGTAGAGGAGGGCAAAGAAGATGATGTTGATGGTGGGATGACAATTGGAGTAGATAGAGTGACATGTAGAGTGTGGCCTCGTCAAGGAGGAGAAGGAGAGGAGGCGGAGGCTAAGGGGAAGATGGATGGAGGACAGTGGTTGCCCATGGTTGAGAGTCGGCCATGGTTCTCAGGGACCCAAATGGTAACAAATCCTAAGGTCAAAGCACATACTACTGTATATATGGTAAAGGTTCCTGACAAGAACAGAGGTGGCTTCTGTGTTGCTACAATGGCCTCAAGCTCAGCTTGGACAACAAAGCAGAACAAAAAGTTTGAGAATGCTTTGGCCATCTATGACAAGGACACCCCAGATCGATGGCAGAAAATGGCCAGAGCCATAGGAGGGAAGACAGTGGAGGAAGTGAAAAGGCATTATGATATGCTTGTGGAAGATTTGAAGCAGATTGAAGAAGGCCATGTACCCTTGCCCAATTACAGAAATGGTTCAACAATAGGAGGCAGCATCAAAGGTTACAGTTGCACAGATGAAAAACAAAGGTTGAAGGTTCTAAGCCTACAGTGA 597 0.4724 MEGEEVGALGSVEEGKEDDVDGGMTIGVDRVTCRVWPRQGGEGEEAEAKGKMDGGQWLPMVESRPWFSGTQMVTNPKVKAHTTVYMVKVPDKNRGGFCVATMASSSAWTTKQNKKFENALAIYDKDTPDRWQKMARAIGGKTVEEVKRHYDMLVEDLKQIEEGHVPLPNYRNGSTIGGSIKGYSCTDEKQRLKVLSLQ* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02329 198 FunFam Transcription factor SRM1 100 167 - -
Rops9g02329 198 Coils Coil 143 163 - -
Rops9g02329 198 Gene3D - 99 167 - -
Rops9g02329 198 SUPERFAMILY Homeodomain-like 108 161 IPR009057 -
Rops9g02329 198 MobiDBLite consensus disorder prediction 9 24 - -
Rops9g02329 198 CDD SANT 107 154 IPR001005 -
Rops9g02329 198 ProSiteProfiles SANT domain profile. 103 158 IPR017884 -
Rops9g02329 198 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 103 174 IPR044636 GO:0003700
Rops9g02329 198 SMART sant 104 156 IPR001005 -
Rops9g02329 198 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02329 Rops-Chr9 42791336 42796622 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops9g02329 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02329 - - gmx:100804049 170.244