Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02323 ATGAGTTTAAGTTCAAGAACTGAATGGTTTGCGTTAATTGAACTTCGTTCTTCAATGGGGATAAGGGGAAAAGATTGGCCTATAAAAGCTGAACCTTGCCGGAATTGGACCGGAGTCCGGTGCTGGAACGGTAGAGTGGTGAACATCAATGTTTCTGGGTTGAAAAGAACCCGGTTGGGTCGTCTCAACCCAAATTTTGAAGTGGATTCTCTTGCCAATTTCACACTCTTGGACTCATTCAACGCTTCAGGTTTCATGCTCAATGGTTCTATTCCTGAATTGTTTGGTGTTAGCCTTGGTGCTTTACAAGTGCTAGACTTAAGCTCTTGTTCTATAACTGGTGTGATTCCTGATTCGATTGGGGGTTTGAGTAAGTTGAAGTTTTTGTTCCTTTCGGGGAATAATCTCACTGGTAAAATGCCTTCGACTTTAGGATTGTTATCTGAACTTTCTGTTCTTAATCTCTCTAGGAACTTGCTTTCAGGAGAAGTGCCTGGCTCTTTGTCTAAGCTTGGTAACCTTACAAAGCTTGATCTTTCTTCTAATTACTTATCTGGGTCTATTCCACCTAAACTGGGTAACCTTGCAAATCTCCAAAATTTGAACCTTTCTTATAATCAACTCACTTACTTGGTTCCCTCTCAACTTGGTAACCTTTCCAAGTTGGTTAAGCTTGATCTTAGCATGAATTTTCTGTCAGGGTCATTGTCTGGTAGTTTGTTTTCTTCTACTCTTTTAGCTCTTGAAGTACTCATGCTTGGTGGGAATTTACTTGGTGGTGCTCTTCCTGATACATTGTGGTCAATGCCCAGTTTGCACTTTCTTGATGTATCCAGCAACAACCTCACTGGTCCACTGCCTAAATTGTCTAGTTCAAATGTTAGCTCTTATGATGCCAAGTTTAATCTCTCAAACAATTTGTTATATGGATCCTTGAATACTTCGCTGAACAAGTTTAAAATGATTGATTTGTCCGGTAATTATTTGGAAGGTGATATGGAAGGTGGTGGTCTTAGTAATGTTAGTCTAGACAGAAATTGCCTACAGAATATTCCAAATCAGAGGGGTTTGGGAGAGTGTAGACTGTTTTATGTTCAGAGAAATTTACCCTTTGCTGCTGGTGCCCCGGAATCTGAATCCATGAGCAAAAAAAGTGTGGTATTCATACTGGTAGGAATATTAGGTGGGCTTGGCTTTATTGTGCTACTGGTGTTAGTTCTCATACTGGTTCTAAAACAATGTCATAATAGTAAAAGGTTAGAAATTCAAAGGGGGGCTCCAAATGGGGGGCCTGTTCCAGAAGGGGAAAGTCCTACACCTCCTAAGGATCCTGTCTTCGTTACTGGCGTGGGAGAATCATTTACTTTTAACCAATTGCTCAATTTGACTGGCAATTTTGATGAAGCAAATATCATAAAGCATGGTCATTCTGGAGACCTCTTTTGGGGAGTGTTGGAAAATGGAGCAACTGTAGTTGTCAAAAAGGTAGATTTAAATTTACTCAAGAGAGAATCTTATGTTGTGGAATTGGGATTATTGAGCAAGGTTTCACATGCAAGATTGGTCCCAATCCTGGGGCACTGCTTGGAGAATGAGAATGAGAAATGTATAGTTTACAAATATATGCCAAATGGAGATTTGGCTACTTCTTTGCATAGAGTCACTGGTTCAGATGGTAAATCACAGTCCTTGGATTGGATAACGAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTAGCTTACCTGCACGAGTGCAGCCCTCCCCTTGTTCACAGAGATGTCCGAGCTAGCAGTATACTTCTTGACGATAAATTTGAAGTGCGACTTGGAAGTTTGAGTGAGGTTACCGCCCAAGGAGATCTTCATCAGGGTGTCTTCTCAAGGGTTTTCAACAAGCCACCATCTTCTAATCAAGGCACTTCTGGTAAATCATCTGTGACAAGTGCCTATGATGTCTACTGTTTTGGGAAGATTTTACTCGAGCTCGTTACTGGTAATGTCAATGTCAGCAAATCAGATGATGCCACCACAAAAGAGTGGTTAGAGCAAACCCTGTGTTACATCAGCATATTCGATAAAGAACGGTTGACTAAGATTGTTGACCCGTCTTTGATCGTGGATGAGGACTTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAAATCATGCCTGAATCCAAAGCCTTCCAAACGTCCTCCTATGAGACATGTCCTCAAAGCACTGGAAAATCCATTGAAGATTGTAAGAGAAGAAAATCTTAGCTCAGTGAAGTTGAGAACAACTTCATCTAATAGGTCTTGGAACACTGCATTCTTTGGTAGCTGGAGAAACAGCTCATCATCAGATAGTGCTGCTGGCACAGCACATGCAAACAAGGAGGGTGGTACTAGTGGCATTAAACAAGCAGGAAGAGTAGGTTCACAAGGTAGTGGTGGCAATGATCACTCATCTTCCAATAAAAGGTCATCCAATGAAATTTTCCCTGAACCATTGGAAGAGCAAGACGTGGAGAATGGAGTGGCAAGATGA 2535 0.4146 MSLSSRTEWFALIELRSSMGIRGKDWPIKAEPCRNWTGVRCWNGRVVNINVSGLKRTRLGRLNPNFEVDSLANFTLLDSFNASGFMLNGSIPELFGVSLGALQVLDLSSCSITGVIPDSIGGLSKLKFLFLSGNNLTGKMPSTLGLLSELSVLNLSRNLLSGEVPGSLSKLGNLTKLDLSSNYLSGSIPPKLGNLANLQNLNLSYNQLTYLVPSQLGNLSKLVKLDLSMNFLSGSLSGSLFSSTLLALEVLMLGGNLLGGALPDTLWSMPSLHFLDVSSNNLTGPLPKLSSSNVSSYDAKFNLSNNLLYGSLNTSLNKFKMIDLSGNYLEGDMEGGGLSNVSLDRNCLQNIPNQRGLGECRLFYVQRNLPFAAGAPESESMSKKSVVFILVGILGGLGFIVLLVLVLILVLKQCHNSKRLEIQRGAPNGGPVPEGESPTPPKDPVFVTGVGESFTFNQLLNLTGNFDEANIIKHGHSGDLFWGVLENGATVVVKKVDLNLLKRESYVVELGLLSKVSHARLVPILGHCLENENEKCIVYKYMPNGDLATSLHRVTGSDGKSQSLDWITRLKIAIGAAEGLAYLHECSPPLVHRDVRASSILLDDKFEVRLGSLSEVTAQGDLHQGVFSRVFNKPPSSNQGTSGKSSVTSAYDVYCFGKILLELVTGNVNVSKSDDATTKEWLEQTLCYISIFDKERLTKIVDPSLIVDEDLLEEVWAMAIVAKSCLNPKPSKRPPMRHVLKALENPLKIVREENLSSVKLRTTSSNRSWNTAFFGSWRNSSSSDSAAGTAHANKEGGTSGIKQAGRVGSQGSGGNDHSSSNKRSSNEIFPEPLEEQDVENGVAR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02323 844 Gene3D Phosphorylase Kinase; domain 1 442 541 - -
Rops9g02323 844 ProSiteProfiles cAMP/cGMP binding motif profile. 471 524 IPR000595 -
Rops9g02323 844 SMART LRR_typ_2 269 292 IPR003591 -
Rops9g02323 844 SMART LRR_typ_2 245 268 IPR003591 -
Rops9g02323 844 SMART LRR_typ_2 99 122 IPR003591 -
Rops9g02323 844 SMART LRR_typ_2 123 146 IPR003591 -
Rops9g02323 844 SMART LRR_typ_2 219 243 IPR003591 -
Rops9g02323 844 SMART LRR_typ_2 171 194 IPR003591 -
Rops9g02323 844 SMART LRR_typ_2 147 170 IPR003591 -
Rops9g02323 844 SMART LRR_typ_2 195 218 IPR003591 -
Rops9g02323 844 Pfam Leucine Rich Repeat 173 195 IPR001611 GO:0005515
Rops9g02323 844 PRINTS Leucine-rich repeat signature 195 208 - -
Rops9g02323 844 PRINTS Leucine-rich repeat signature 174 187 - -
Rops9g02323 844 Pfam Protein tyrosine and serine/threonine kinase 472 742 IPR001245 GO:0004672|GO:0006468
Rops9g02323 844 SUPERFAMILY Protein kinase-like (PK-like) 443 743 IPR011009 -
Rops9g02323 844 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 178 744 - -
Rops9g02323 844 ProSiteProfiles Protein kinase domain profile. 466 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02323 844 SUPERFAMILY L domain-like 30 289 - -
Rops9g02323 844 Pfam Leucine rich repeat 97 136 IPR001611 GO:0005515
Rops9g02323 844 MobiDBLite consensus disorder prediction 778 844 - -
Rops9g02323 844 FunFam Leucine-rich repeat receptor protein kinase EMS1 165 265 - -
Rops9g02323 844 MobiDBLite consensus disorder prediction 803 827 - -
Rops9g02323 844 MobiDBLite consensus disorder prediction 422 442 - -
Rops9g02323 844 FunFam Predicted protein 437 541 - -
Rops9g02323 844 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 68 164 - -
Rops9g02323 844 Gene3D Ribonuclease Inhibitor 168 370 IPR032675 -
Rops9g02323 844 Gene3D Transferase(Phosphotransferase) domain 1 542 765 - -
Rops9g02323 844 FunFam Putative LRR receptor-like serine/threonine-protein kinase 542 763 - -
Rops9g02323 844 Gene3D Ribonuclease Inhibitor 7 167 IPR032675 -
Rops9g02323 844 ProSiteProfiles Leucine-rich repeat profile. 197 218 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02323 Rops-Chr9 42713771 42718728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02323 7 634 Miscellaneous Gene Families AT2G16250 49.333 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Rops9g02323 PK_Tyr_Ser-Thr 3.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02323 - - gmx:100798381 1129.78