Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02291 ATGGAAGTTTGTGGGCCTCTCAAATCTGATAGTAGATTAAAGCACCGCCCTTTGACCCCTCTTAGGATTTTAAGGGGAGTGATATGTATAGTGGTGTTTCTTTCTACAGCTTTTATCTGTTTAGTATATTTTACGCCAGTGGCAGTTGTAGGATTGCGGCTTTTCAGCACTCGTTGTAGCAGGAAGACAGTGTCGTTCATTTTTGGACTTTGGCTAGCTATGTGGCCCTTTCTATTCGAAAAGATAAACAAAACTAAAGTTGTCCTTTCAGGGGATAGTGTTCCAATGAGGGAACGTGTTTTACTGATTGCTAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGGATCTTGCACTGCGAAAGGGAAGATTGGGATCCATAAAATACATCCTTAAGAGCAGCTTGATGAAACTACCTATCTTTGGTTGGGGATTTCACATTCTGGAATTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGCAAATACTGAACCAAAAGCTTTCAACATTAAAGGATCCTCAAGATCCTTTATGGCTAGCTATTTTTCCTGAAGGAACTGATTATACTGAACAGAAGAGTAAAAGTAGTCAAAAATTTGCTGCTGAAGTTGGGCTCCCTGTGCTGACAAACGTATTACTTCCAAAAACAAAGGGGTTTCATGCTTGCTTGGAAGCTCTACGAGGCTCATTGGATGCAGTGTATGATGTGACAATCACATACAAGAATCAGTGTCCTTCCTTTCTAGACAATGTTTTTGGTGTTGATCCTTCAGAAGTGCACATGCATGTTCGGCGTATCCCTGTTGAGGAGATTCCAGTTTCCGAAGCTAAAGCTGCTTCTTGGCTAATCAATACATTCCAGACCAAGGACCAATTGCTTTCAGATTTCAAGGTTGAAGGCCATTTCCCAAACCAACTAAATGAAAAGGAAATTTCTACATTCAAGTGCCTACTCACTTTTACTGTGGTAGTTTCTTTTACAGCCATGTTTACTTATTTTACATTTTTTTCTCTCATTTGGTTCAAGTTGTATGTCGGCCTATCTTGTGCATATCTTGCTATTGCAACGCATTTCAATTTTCAATTGATGCCTTTGACAAATTATGTTCATGCACTCTATAACAGCAAGAAACAAAAGAGTGGATAG 1152 0.3984 MEVCGPLKSDSRLKHRPLTPLRILRGVICIVVFLSTAFICLVYFTPVAVVGLRLFSTRCSRKTVSFIFGLWLAMWPFLFEKINKTKVVLSGDSVPMRERVLLIANHRTEVDWMYLWDLALRKGRLGSIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDEQILNQKLSTLKDPQDPLWLAIFPEGTDYTEQKSKSSQKFAAEVGLPVLTNVLLPKTKGFHACLEALRGSLDAVYDVTITYKNQCPSFLDNVFGVDPSEVHMHVRRIPVEEIPVSEAKAASWLINTFQTKDQLLSDFKVEGHFPNQLNEKEISTFKCLLTFTVVVSFTAMFTYFTFFSLIWFKLYVGLSCAYLAIATHFNFQLMPLTNYVHALYNSKKQKSG* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02291 383 CDD LPLAT_LCLAT1-like 76 266 - -
Rops9g02291 383 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Rops9g02291 383 Pfam Acyltransferase C-terminus 254 323 IPR032098 -
Rops9g02291 383 SMART plsc_2 100 222 IPR002123 GO:0016746
Rops9g02291 383 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 37 247 - -
Rops9g02291 383 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 17 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02291 Rops-Chr9 42323829 42327615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02291 1 366 Miscellaneous Gene Families AT1G75020 66.393 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02291 K13513 - gmx:100808657 696.812