Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02287 ATGAAGTCCATTGCAAAATCAGAACCACCACTCTTGTTCTTTCTCATCCTCTCCCTATTGTTGCTACCTTGTTTATCCTCTCCCAACAATGCCTCAAACATTGCAAATCAATTCAAAGAAGCCCCTCAATTCTACAACTCACCAAACTGTCCCTCCATAAGTGATGATAACAATGAAGACATTGATACATATATTTGCTCTGAGGAAGTTGTACATGTTGCAATGACCCTTGACACAACATACATAAGAGGCTCCATGGCAGCAATTCTCTCAGTTCTTCAACACTCTTCATGTCCCCAAAACATTTTCTTCCACTTTGTTTGTTCCTCCAACAAGTCCCTTTTACACTCCACCATTTCCAAATCATTCCCTTACCTCAAATTCCAAGTTTACAACTTTGATGATTCAATTGTATCTGGCCTCATCTCTACCTCTATTCGTTCAGCTCTTGATTGCCCTCTAAACTATGCACGTAGCTACTTGGCTAACCTTGTTCCATTATGTGTTAGGAGAGTGGTGTACCTTGATTCAGACCTTATCTTAGTTGATGATATCACAAAACTTGCAGCCACCCCATTAGGGGAAAATTCTGTTTTAGCAGCACCTGAATATTGCAATGCAAATTTCACCTCCTATTTCACTCCAACATTTTGGTCCAACCCTTCTTTGTCACTCACTTTTGCAAACAGAAAGGCTTGTTATTTCAACACAGGAGTGATGGTGATTGATCTAGAAAAATGGCGTGCAGGGGATTACACAACAAAGATTGAGGAATGGATGGAACTGCAGAAGAGGATGAGAATCTATGAGCTTGGTTCTTTGCCACCTTTTTTGCTTGTCTTTGCTGGGAATATAGTTCCAGTGGATCATAGGTGGAACCAACATGGTCTTGGAGGTGATAATTTTCGTGGTCTTTGTAGGGATCTTCACCCTGGTCCTGTGAGTTTATTGCATTGGAGTGGGAAAGGTAAGCCATGGGTTAGATTGGATGCTAATAGGCCTTGTCCTTTGGATGCACTTTGGGCACCTTATGATCTATTGCAGACCCCATTTTCTTTTGATTCTTGA 1068 0.412 MKSIAKSEPPLLFFLILSLLLLPCLSSPNNASNIANQFKEAPQFYNSPNCPSISDDNNEDIDTYICSEEVVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHFVCSSNKSLLHSTISKSFPYLKFQVYNFDDSIVSGLISTSIRSALDCPLNYARSYLANLVPLCVRRVVYLDSDLILVDDITKLAATPLGENSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFANRKACYFNTGVMVIDLEKWRAGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFSFDS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02287 355 SUPERFAMILY Nucleotide-diphospho-sugar transferases 71 346 IPR029044 -
Rops9g02287 355 Pfam Glycosyl transferase family 8 72 328 IPR002495 GO:0016757
Rops9g02287 355 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 348 - -
Rops9g02287 355 FunFam Hexosyltransferase 72 335 - -
Rops9g02287 355 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 72 335 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02287 Rops-Chr9 42292682 42294253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02287 27 355 Glycosyltransferase AT1G19300 76.946 6.59e-180 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02287 K20893 - gmx:100818099 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02287 9 42292682 42294253 Rops9g02287 9 42292682 42294253 ECH