Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02276 ATGCATGCTCTCATTTACTTCAACCCTCGTAGTCTCCACGGTGATGGAACCTTCACGAAGGAGTTCATGCGTGCATTCGAGGATGTTGCCACACTTAGTTTTGGAAGCTTCATACTTGCGGGACGTGACTCTACATCTTCCGTACTAAGCTGGTTCTTTTGGAGTCTTTCTTCAAAGTCACACGTGAAGAGGAAAATCCTTGATGAGATTGAAACATTTCGTTCCCGAAAAGGTGGAGGGGATCAGCCTTTTGGGTATGAAGAACTAAAAGAGATGCAGTACTTACACGCCGCAATTTCGGAGACAATGAGGTTATACCCTCCCGTTACGATGGGTGTGAGAGCTTGCTTGAACGACGATGTTTTGTCGGATGGTACCATGATAAGGAAAGATTTGTTTATTATGTATCATGTTTACGTCATATGGAGGATGGAGAGTGTGTGGGGAAAAGATTGCACGGAATTTAAGCCCGAAAGATGGTTCGAGAACGGTGTGTACCGAACCGAGAGCCCATTTCGATTTCCAGTATTCAACGTTGGTCCTAGAACGTGTCTTAGGAAAGTTTTAGCTTATATTCAGATGAAGTCTATTGTAGCTTCTGTGATGGAGAGGATTGAGATCGATGCACTGGGTAAGGACATGTGTCCTGAGCTTCTTTTGTCTTTCACTTTAAGGATTAAAGGAGGGTTACCTGTGAAGGTAAGGGCAAGGAAGATACATAATTTTCCTTAA 732 0.4358 MHALIYFNPRSLHGDGTFTKEFMRAFEDVATLSFGSFILAGRDSTSSVLSWFFWSLSSKSHVKRKILDEIETFRSRKGGGDQPFGYEELKEMQYLHAAISETMRLYPPVTMGVRACLNDDVLSDGTMIRKDLFIMYHVYVIWRMESVWGKDCTEFKPERWFENGVYRTESPFRFPVFNVGPRTCLRKVLAYIQMKSIVASVMERIEIDALGKDMCPELLLSFTLRIKGGLPVKVRARKIHNFP* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02276 243 PRINTS P450 superfamily signature 97 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS P450 superfamily signature 40 57 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS P450 superfamily signature 184 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS P450 superfamily signature 175 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 Pfam Cytochrome P450 34 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 SUPERFAMILY Cytochrome P450 31 237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS E-class P450 group I signature 184 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS E-class P450 group I signature 49 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS E-class P450 group I signature 96 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS E-class P450 group I signature 174 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PRINTS E-class P450 group I signature 29 46 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 Gene3D Cytochrome P450 20 237 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g02276 243 PANTHER CYTOCHROME P450 34 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02276 Rops-Chr9 42169119 42170065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02276 36 237 Cytochrome P450 AT3G56630 56.585 1.08e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02276 - - gmx:100812147 274.248