Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02270 ATGGGTAACAGGATTGTTAGGCCCAGTTGCAATTTGAGATTCGAAACCTCAGCCATCTTCTATAATTCTACAGCACCAGTACCACCTCCCCCGTCTACCACCACCACCACCACCACCATTTCCTCACAAGCTCAAACAAAAGATGATGATGATGATGAAATTGAAATTTTTGAGTCATTGCAATTCAACTTTAACACTATACGAGATGCTACAAATGGCTTTTCGAATTTTAATAAACTTAGACAAGGCGGATTTGGAGATGTTTATAAGGGTAGGCTCTCAAATGGACAAGAGATTGCTGTCAAAAGGTTGTCAAAGGATTCTAGCCAAGGGGATCTAGAATTTAAGAATGAAGTGCTTTTAGTGGCTAAGCTTCAACATCGAAATTTAGTAAGGCTACTTGGTTTTTGTTTGGAACAAAGAGAAAGGCTACTTATCTATGAATTTGTTCATAATAAAAGTCTTGATTACATCATATTTGATAAAACCAAAAGAGAAAAACGAGATTGGGAAAAATGCTACAAAATCATTGAAGGCATTGCTCGAGGCATTCTTTATCTTCATGAGGATTCTCAACTACGCATTATACATCGTGATCTCAAAGCAAGCAACATTCTCTTGGATGAAGAGATGAATCCTAAGATACCTGATTTTGGCATGGCAAGACTTTTTGTTATGGACCAAAGTCAAGGAAATACTAATAGAGTTGTTGGGCCCTATGGATATATGGCACCTGAGTATATAATGGAAGGACAATTCTCGGTGAAATCAAATGTTTTTAGTTTTGGTGTACTGGTTCTTGAGATTATAAGTGGCTAA 819 0.3724 MGNRIVRPSCNLRFETSAIFYNSTAPVPPPPSTTTTTTTISSQAQTKDDDDDEIEIFESLQFNFNTIRDATNGFSNFNKLRQGGFGDVYKGRLSNGQEIAVKRLSKDSSQGDLEFKNEVLLVAKLQHRNLVRLLGFCLEQRERLLIYEFVHNKSLDYIIFDKTKREKRDWEKCYKIIEGIARGILYLHEDSQLRIIHRDLKASNILLDEEMNPKIPDFGMARLFVMDQSQGNTNRVVGPYGYMAPEYIMEGQFSVKSNVFSFGVLVLEIISG* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02270 272 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 150 241 - -
Rops9g02270 272 SMART serkin_6 74 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02270 272 ProSiteProfiles Protein kinase domain profile. 74 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02270 272 SUPERFAMILY Protein kinase-like (PK-like) 53 271 IPR011009 -
Rops9g02270 272 Pfam Protein tyrosine and serine/threonine kinase 78 271 IPR001245 GO:0004672|GO:0006468
Rops9g02270 272 Gene3D Transferase(Phosphotransferase) domain 1 150 272 - -
Rops9g02270 272 Gene3D Phosphorylase Kinase; domain 1 34 149 - -
Rops9g02270 272 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 272 - -
Rops9g02270 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Rops9g02270 272 MobiDBLite consensus disorder prediction 22 49 - -
Rops9g02270 272 FunFam Cysteine-rich receptor-like protein kinase 10 37 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02270 Rops-Chr9 42007894 42010919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02270 42 272 Receptor kinase-like Gene Family AT4G23190 66.234 6.22e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops9g02270 PK_Tyr_Ser-Thr 7.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02270 - - lang:109335396 365.155