Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02269 ATGAATGTTCTTTCTTTAAGGCTACTTTCCTTTCTCTGTTGTCTCCTTCTCATAATCTTTTTCACATCACAAGCCAACGCCAAGTACGATTCACTAAGCTCCCACTACTGTATTAAGAACAGAGGTAACTACACGGCCAATAGCACCTACCACAGAAACCTCAACACCCTTTTATCCACTCTCACTACCCACACAGAAATTGATTACGGTTTCTACAATTTCTCATATGGCGAAAACAGTGACAAAGTAAACGCCATTGGGCTGTGCAGAGGGGATGTTAAGCCAGATGAGTGCCGCGGTTGCCTCAAATATTCTATAGCAAAGCTCACAGAGTTTTGTCCAAACCAGAAAGAGGCAATTGGGTGGTATGACAATGAGAGATGCATGCTACGCTACTCAGACCGCACAATATTTGGCATCATGGAAGATTCGCCTTTCTATCATTGGATCAGCCCCGAGAATGCAACTGATGTGAATCAGTTCAATGTAGTGGTGAGGAACTTGTTAGATAACTTAACAAGCAAAGCTGCATCAGGTGACTCTCGTCTTAAATATGCTGCAGCAAGTGCACCAGGTCCTAATTTTCAAACCATATATGGTTTGGTGCAGTGCACGCCTGATTTGTCTGAGTCACAATGCAATGCCTGCTTGGTTGAGTCTATGAGACCTATCGGATTGGATTGCTGTAGAACCAGGATGGGTAACAGGATTGTTAGGCCCAGTTGCAATTTGAGATTCGAAACCTCAGACATGTTCTATAATTCTACAGCACGAGCACCACCTCCCCCGTCTACCACGACCACCATTTCCTTTCAAGGAAAGAGCAACAAAACTGTTGTCGTTGCTATTGTTGTTGCCGTTACTGTTGTTGTTGTTGTTATGGTCATTTTTATATGCATCTATTTAGGAGTGAGGAAGCAAAGGAAAAAGTTTGAAACTCAAACAAAAGATGATGATGATGATGAAATTGAAATTTTTGAGTCATTGCAATTCAACTTTAACACTATACGAGATGCTACAAATGGCTTTTCGGATTCTAATAAACTTGGACAAGGCGGATTTGGAGATGTTTATAGGGGTACGCTCTCAAATGGCCAAGAGATTGCTGTCAAAAGGTTATCAAAGGATTCTGGCCAAGGGGATTTAGAATTTAAGAATGAAGTGCTTTTAATGGCTAAGCTTCAACATCGAAATTTAGTAAGGCTACTTGGTTTTTGTTTGGAACGAAGAGAAAGGCTACTTATCTATGAATTTGTTCCTAATAGAAGTCTTGATTACATCATATTTGATAAAACCAAGAGAGCAAAGCTAGATTGGGAAAAACGCTACAAAATCATTGAAGGCATTGCTCGAGGCATTCTTTATCTTCATGAGGATTCTCGACTACGCATTATCCATCGTGATCTCAAAGCAAGCAACATTCTCTTGGATGAAGAGATGAATCCTAAGATATCTGATTTTGGCATGGCAAGACTTTTTGTTGTGGACCAAAGTCAAGGAAATACTAATAGAGTTGTTGGGACCTATGGATATATGGCACCTGAGTATATAATGGAAGGACAGTTCTCGGTGAAATCAGATGTTTTTAGTTTTGGTGTACTAGTTCTTGAGATTATAAGTGGCCAAAAAAATAATGGCTTTCGTCATGGGGAGAATGTAGAGCATCTAATGAGCTTTGCTTGGAGAAATTGGAGGAATGGGTCAACAATAAATATTATAGATCCTACATTAAACAATTATTCACAAAATGAAATAATGAGATGCATCCACATTGGGTTACTCTGTGTTCAAGAAAATGTAGCTGCCAGGCCAACCATGAATTCCATTGTATTGATGCTTAATAGTTATTCTGTCACTCTCCCTGTACCTTCAGAACCTGCATTTTATATGGATGGTAGAAGTGAAAATCTTCCGGACGTGCATACATGGGAGTATAATTCAACTCAAGCATCGGTCAATGAGGTTTCAATTACAGAGACAATTCCTCGCTAG 1992 0.3986 MNVLSLRLLSFLCCLLLIIFFTSQANAKYDSLSSHYCIKNRGNYTANSTYHRNLNTLLSTLTTHTEIDYGFYNFSYGENSDKVNAIGLCRGDVKPDECRGCLKYSIAKLTEFCPNQKEAIGWYDNERCMLRYSDRTIFGIMEDSPFYHWISPENATDVNQFNVVVRNLLDNLTSKAASGDSRLKYAAASAPGPNFQTIYGLVQCTPDLSESQCNACLVESMRPIGLDCCRTRMGNRIVRPSCNLRFETSDMFYNSTARAPPPPSTTTTISFQGKSNKTVVVAIVVAVTVVVVVMVIFICIYLGVRKQRKKFETQTKDDDDDEIEIFESLQFNFNTIRDATNGFSDSNKLGQGGFGDVYRGTLSNGQEIAVKRLSKDSGQGDLEFKNEVLLMAKLQHRNLVRLLGFCLERRERLLIYEFVPNRSLDYIIFDKTKRAKLDWEKRYKIIEGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFVVDQSQGNTNRVVGTYGYMAPEYIMEGQFSVKSDVFSFGVLVLEIISGQKNNGFRHGENVEHLMSFAWRNWRNGSTINIIDPTLNNYSQNEIMRCIHIGLLCVQENVAARPTMNSIVLMLNSYSVTLPVPSEPAFYMDGRSENLPDVHTWEYNSTQASVNEVSITETIPR* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02269 663 Gene3D Phosphorylase Kinase; domain 1 305 418 - -
Rops9g02269 663 CDD STKc_IRAK 349 614 - -
Rops9g02269 663 Gene3D - 30 136 IPR038408 -
Rops9g02269 663 Gene3D - 143 250 IPR038408 -
Rops9g02269 663 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Rops9g02269 663 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02269 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 661 - -
Rops9g02269 663 FunFam Cysteine-rich receptor-like protein kinase 10 305 418 - -
Rops9g02269 663 SMART serkin_6 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02269 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Rops9g02269 663 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 137 - -
Rops9g02269 663 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Rops9g02269 663 Gene3D Transferase(Phosphotransferase) domain 1 419 620 - -
Rops9g02269 663 FunFam cysteine-rich receptor-like protein kinase 10 419 620 - -
Rops9g02269 663 Pfam Salt stress response/antifungal 37 134 IPR002902 -
Rops9g02269 663 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Rops9g02269 663 Pfam Protein tyrosine and serine/threonine kinase 346 611 IPR001245 GO:0004672|GO:0006468
Rops9g02269 663 FunFam Cysteine-rich receptor-like protein kinase 10 146 251 - -
Rops9g02269 663 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Rops9g02269 663 SUPERFAMILY Protein kinase-like (PK-like) 328 648 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02269 Rops-Chr9 41980624 41984804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02269 6 663 Receptor kinase-like Gene Family AT4G21410 48.387 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops9g02269 PK_Tyr_Ser-Thr 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02269 - - gmx:100791056 826.624