Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02265 ATGAGATTCAAAACAACGTTCTCCTTTTGTGAACCTACAGCAGCATCTCCATTCCCCCCATCCATCACCACTAGTAGCACTTCCTCACAAGGAAAGAGCAGCAAAACTACCACTGCCATCGCCATAGCAGTACCCATTGTTGTTGTTGTTACGGTTCTCATTTTTATTTGCAACTATTTAAGAATGAGGAAGCCAAGGAAAAAGTTTGAAACTCAAGACAATGAAATTAAAATTTCTGGGACATTGCAATTCAAATTTAACACCATACAAAATGCTACGAACCACTTCTCTGATTCTAATAAACTTGGACAAGGCGGATTTGGGACTATTTACAAGGGTAGGCTCTCAAATGGACAAGAGATTGCTGTTAAAAGGTTGTCAAAGAATTCTTGCCAAGGAGAGCTAGAATTTAAGAATGAGGTGCTTTTAATGGCTAACCTTGAGCACCCTAATTTAGTGAGGCTATTTGGCTTCTGTCAGGAAGGAAGAGAAAGGCTACTTGTCCATGAATTTGTTCCTAATAAAAGCCTTGATCACTTCATATTTGATCAAACAAAGAGAGTACAATTAAATTGGGACAGGCGATACAAAATCATTGTAGGTATCGCTCAAGGCATTGTTTACCTTCATGAGGATTCTGAACTATGCATTATCCATCGTGATCTTAAAGCAAAACACATTCTCTTAGATGAAGAGATGAATCCTAAGATATCCGATTTTTGCTTGGCAAGACAGTTGGGTGTGGACCAAACTCAGGGGGATACAAATAGAATTGTTGGAACCATTGGATATATGGCACCTGAGTATGCAATGCATGGACAATATTCAGTGAAGTCAGATGTCTTTAGCTTTGGTATACTGGTTCTTGAGATTGTAAGTGGCCAAAAAGCCAGTGACTTCATTTGTCATCGGGAGAATGCAGAGGATCTTATGAGCCTTGCATGGAAAAACTGGAGGGATGGGTCAGCTACAAAAATTATAGATCCTACATTAAATAATGATTATCAAAATGAAATAATAAGATGCATCCACATTGGATTACTCTGCGTTCAAGAAAATGCAGCTGACAGGCCAACCATGACTGCCATTGTACAAATGCTAAATAGCTATACTGACAATCTCCCTGTACCTTCAAAACCTGCATTTTGTGTGGATAGTAGCCCTGAAAACTTTCAAGACATGCGGTCATGGGAGTACGATTGA 1203 0.3924 MRFKTTFSFCEPTAASPFPPSITTSSTSSQGKSSKTTTAIAIAVPIVVVVTVLIFICNYLRMRKPRKKFETQDNEIKISGTLQFKFNTIQNATNHFSDSNKLGQGGFGTIYKGRLSNGQEIAVKRLSKNSCQGELEFKNEVLLMANLEHPNLVRLFGFCQEGRERLLVHEFVPNKSLDHFIFDQTKRVQLNWDRRYKIIVGIAQGIVYLHEDSELCIIHRDLKAKHILLDEEMNPKISDFCLARQLGVDQTQGDTNRIVGTIGYMAPEYAMHGQYSVKSDVFSFGILVLEIVSGQKASDFICHRENAEDLMSLAWKNWRDGSATKIIDPTLNNDYQNEIIRCIHIGLLCVQENAADRPTMTAIVQMLNSYTDNLPVPSKPAFCVDSSPENFQDMRSWEYD* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02265 400 SUPERFAMILY Protein kinase-like (PK-like) 72 367 IPR011009 -
Rops9g02265 400 FunFam Cysteine-rich receptor-like protein kinase 10 60 171 - -
Rops9g02265 400 Gene3D Phosphorylase Kinase; domain 1 58 171 - -
Rops9g02265 400 Pfam Protein tyrosine and serine/threonine kinase 99 367 IPR001245 GO:0004672|GO:0006468
Rops9g02265 400 ProSiteProfiles Protein kinase domain profile. 96 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02265 400 PIRSF TyrPK_CSF1-R 100 191 - -
Rops9g02265 400 PIRSF TyrPK_CSF1-R 179 297 - -
Rops9g02265 400 PIRSF TyrPK_CSF1-R 10 73 - -
Rops9g02265 400 PIRSF TyrPK_CSF1-R 343 376 - -
Rops9g02265 400 CDD STKc_IRAK 102 368 - -
Rops9g02265 400 Gene3D Transferase(Phosphotransferase) domain 1 172 377 - -
Rops9g02265 400 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Rops9g02265 400 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 387 - -
Rops9g02265 400 FunFam cysteine-rich receptor-like protein kinase 10 172 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02265 Rops-Chr9 41958819 41962547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02265 17 384 Receptor kinase-like Gene Family AT4G11530 55.676 2.65e-138 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops9g02265 PK_Tyr_Ser-Thr 8.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02265 - - lang:109335396 483.411