Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02262 ATGGAAGTTGCTATTATTCCTATTAGCGACTCAACTCGTAGTTATCTGGGAAGCATCTTGGTAAGAGGGGATGTTAAGCCAGATGAGTGCCGCAGTTGCCTCAAATATTATATAGCAAATCTCACAGAGTTTTGTCCAAACCAGAAAGAGGCAATTGGGTGGTATGACAATGAGAGATGCATGTTGCGCTACTCAGACCGCACAATATTTGGCATCATGGAAGATTGGCCTGTCTATCATTTGCACAGCTCCCACAATGCAACCGATGTGGATCAGTTCAATGTAGTGGTGAGGAACTTGTTGGATAACTTAACAAGCAAAGCTGCATCAGGTGACTCTCGTCTTAAATATGCTGCAGCAAGTGCACCAGGTCCTAATTTTCAAACCATATATGGTTTGGTGCAGTGCACGCCTGATTTGTCTGAGTCACAATGCAATGCCTGCTTGATTCAGTCTATGGGACGTATCGGATTGGATTGCTGTAGAGCCAGCACGGGTAACAGGATTGTTAAGCCCAGTTGCAATTTGAGATTCGAAACCTCCGCCATCTTCTATAATTCTACAGCACCAGCACCACCTCCCCCGTCTACCACCACCACCATTCCCTCACAAGGAAAGAGCAACAAAACTGATGTCGTTGCTGTTACCGTTGCTGTTGTTGTTGCTGTTATGGTCATTTTTATATGCATCTATTTAGGAGTGAGGAAGCAAAGGAAAAAGTTTGAAACTCAAACAAAAGATGATGATGATGATGATGAAATTGAAATTTTTGAGTCATTGCAATTCAACTTTAACACTATACAGGATGCTACAAATGGCTTTTCGGATTCTAATAAACTTGGACAAGGCGGATTTGGAGATGTATACAAGGGTAGGCTCTTAGATGGACAAGAGATTGCTGTCAAAAGGTTGTCAAAGGATTCTAGCCAAGGGGATCTAGAATTTAAGAATGAAGTGTTTTTAATGGCTAAGCTTCAACATCGAAATTTAGTAAGGCTACTTGGTTTTTGTTTGGAACGAAGAGAAAGACTACTTATCTATGAATTTGTTCCTAATAGAAGTTTGGATTACATTATATTTGATAAAACCAAGAGAGCAAAACTAGATTGGGAAAAACGCTCCAAAATCATTGAAGGCATTGCTCGGGGCATTCTTTATCTTCATGAGGATTCTCGACTACGCATTATCCATCGTGATCTCAAAGCAAGCAACATTCTCTTGGATGAAGAGATGAATCCTAAGATATCTGATTTTGGCACGGCAAGACTTTTTGTTGTGGACCAAAGTCAAGAAAATACTAATAGAGTTGTTGGAACCTATGGATATATGGCACCTGAGTATATAATGGAAGGACAGTTCTCGGTGAAATCAGATGTTTTTAGTTTTAGTGTACTGGTTCTTGAGATTATAAGTGGCCAAAAAAATAATGGCATTCATCATGGGGAGAATGTAGAGCATCTAATGAGCTTTGCTTGGAGAAACTGGAGGAATGGGTCAGCAATAAATATTATAGATACTACATTAAACAATGATTCACAAAATGAAATAATGAGATGCATCCACATTGGGTTACTTTGCGTTCAAGAAAATGTAGCTGCCAGGCCAACCATGAATTCCATTGTATTGATGCTTAATAGCCATTCTGTCACTCTCCATGTACCTTCAGAACCTGCATTTTATGTGGATGGTAGAAGTGAAAATCTTCCGGACATGCATACAGGGGAGTATAATTCAACTCAAGCATCGGTCAATGAGGCTTCAATTACAGAGACAATTCCCCGCTAG 1785 0.4011 MEVAIIPISDSTRSYLGSILVRGDVKPDECRSCLKYYIANLTEFCPNQKEAIGWYDNERCMLRYSDRTIFGIMEDWPVYHLHSSHNATDVDQFNVVVRNLLDNLTSKAASGDSRLKYAAASAPGPNFQTIYGLVQCTPDLSESQCNACLIQSMGRIGLDCCRASTGNRIVKPSCNLRFETSAIFYNSTAPAPPPPSTTTTIPSQGKSNKTDVVAVTVAVVVAVMVIFICIYLGVRKQRKKFETQTKDDDDDDEIEIFESLQFNFNTIQDATNGFSDSNKLGQGGFGDVYKGRLLDGQEIAVKRLSKDSSQGDLEFKNEVFLMAKLQHRNLVRLLGFCLERRERLLIYEFVPNRSLDYIIFDKTKRAKLDWEKRSKIIEGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGTARLFVVDQSQENTNRVVGTYGYMAPEYIMEGQFSVKSDVFSFSVLVLEIISGQKNNGIHHGENVEHLMSFAWRNWRNGSAINIIDTTLNNDSQNEIMRCIHIGLLCVQENVAARPTMNSIVLMLNSHSVTLHVPSEPAFYVDGRSENLPDMHTGEYNSTQASVNEASITETIPR* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02262 594 Gene3D Transferase(Phosphotransferase) domain 1 350 554 - -
Rops9g02262 594 FunFam cysteine-rich receptor-like protein kinase 10 350 551 - -
Rops9g02262 594 Gene3D - 8 68 IPR038408 -
Rops9g02262 594 Gene3D - 76 182 IPR038408 -
Rops9g02262 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Rops9g02262 594 Pfam Protein tyrosine and serine/threonine kinase 277 542 IPR001245 GO:0004672|GO:0006468
Rops9g02262 594 MobiDBLite consensus disorder prediction 187 206 - -
Rops9g02262 594 SUPERFAMILY Protein kinase-like (PK-like) 256 544 IPR011009 -
Rops9g02262 594 Gene3D Phosphorylase Kinase; domain 1 235 349 - -
Rops9g02262 594 ProSiteProfiles Gnk2-homologous domain profile. 75 183 IPR002902 -
Rops9g02262 594 Pfam Salt stress response/antifungal 18 66 IPR002902 -
Rops9g02262 594 Pfam Salt stress response/antifungal 85 180 IPR002902 -
Rops9g02262 594 SMART serkin_6 274 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02262 594 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Rops9g02262 594 CDD STKc_IRAK 280 545 - -
Rops9g02262 594 ProSiteProfiles Protein kinase domain profile. 274 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02262 594 ProSiteProfiles Gnk2-homologous domain profile. 1 69 IPR002902 -
Rops9g02262 594 FunFam Cysteine-rich receptor-like protein kinase 10 235 349 - -
Rops9g02262 594 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 107 573 - -
Rops9g02262 594 FunFam Cysteine-rich receptor-like protein kinase 10 77 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02262 Rops-Chr9 41881726 41886571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02262 10 594 Receptor kinase-like Gene Family AT4G05200 47.791 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops9g02262 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02262 - - gmx:113000774 717.227