Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02251 ATGCTCAGCAATGGACAAAGTAGGCTGAAAGCATTAGTACCACTCTTCTTACATGAACAACAACACTTTCTTCTTCAACATTCTTCACTTCACCACCAAATGCCTCTTTCTCGCAAATCACTTTCTTCTTCCTCTCCTTCATCGTCTACACATACGACATGGACCAAACAAAACGACGGTGATGGCAAAACAGTTAATTCTGTTCATGTTCGAACACTCACCAGACAGAGAAAACTCCGACACCTCAGTGACCAAGACATTGGTTTGTTACATTCCACTCACTCTTCACCTTCTTCTTCTTCTTCTTCTTCTTCGCTTCCGAGTTCACCTGAGTTATCTCTTAAGTCTCGCTCACTTGGTGGTGGTGGTTCCGACCACCGTTCTTCCTCCTCTGCCGTGCCGCAACCGCTGCCGCTTCCTGAGTCGTGGTTGACCCGCCGACCAGAGTCAACCAACCCCATTTCATTTGAACTTCCGGGGTTTCCACTTTCGAGGAAGACAGTGGATCATGATGGAATGACAAACACAAAACCTTCACAAAATTTAGAAAGATCCTCTTTAGATCCTGCTCTTGGAAATGCAAAATATAATCTGAGAGTGCATATTCCAGCAGCAAGGTTCATGGCAGTTTCTCATGACAATGGCTCTGAAAGCATGCCCTATTTGAGGTTGAGTGTTGCTACCAAGAGTTCCCCCCCCACCAGTCCTGTTACTTGTCCATGTAGATCAAGCAATGTAGAATTCCTTGATCCTACCATCACTTTTCCTCTTGAAATTAATGACAATTTGAAAATGACTGTTCATAGTCCAGACCATTCTCCTCTCCAATGCCAGTTGAGCCTTACTCGTTTCTTCAATCCTAAAAGTCAAGAGGGATCTCAGCACCATAAGTTTTTGTCCAGTGTGTGGCCTGAAAATAACCATGTTGATGCAGCACATCCATTACCCCTTCCTCCTAGAGCTTCATCACCTCCACAATTATATATGCTTCATCAATTAAGTACCATGCATCATGCAACAGAAAATCTGCCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATTGGACGTGGTACCTTTGGAAGTGTTTATCATGCAATCAACTTAGAGAGTGGAGCCTCATGTGCAGTGAAGGAGGTAGATCTAATTCCTGATGATCCTACATCTGCTGAGTGCTGGAAGCAACAAGAGCAGGAAATCAGAATTCTAAGTCAACTACACCACCCCAATATTGTGCAGTATTATGGAAGTGAAATTGTTGGCAATCATTTGAACATATATATGGAGTATGTTCATCCTGGATCCGTTAATAAATTTATGCGTGAACATAGTGGAGCTATGACAGAGTCTGTGGTTCGCAATTTTACAAGGCATATTCTCTCTGGATTGGCTTACTTACATAGTAACAAAACTATCCACAGAGATATCAAAGGTGCAAACTTGCTGGTTAATGAATCAGGCATTGTCAAGCTTGCAGATTTTGGGTTGGCAAAAATTCTGACGGGGAATTCATATGAACTTTCTTTGAAGGGTAGTCCTTATTGGATGGCTCCAGAGGTCATGAAAGCTGCCAGAAATAATGAATCCAATCCTGACCTTGTCATGGCCATTGATATATGGAGCTTAGGGTGCACCATCATTGAAATGTTGACAGGCAAACCTCCTTGGAGTGAATGTGAAGGGCCTTCAGCCATGTTCAAGGTACTGCAACAGTCCCCACCTATACCTGAAACTTTATCTTCAGTGGGAAAGGATTTCCTCCAGCAATGTTTCCAAAGGGACCCTGCAGATAGACCATCTGCAGCAAGGCTTCTAAAGCATGCCTTTGTACAGAATTTGCATGATCAAGATGTTTTAGTTCATCCACAATCGTATCCTAGAGGAGGCACAGGGCCAGGAGATAATTCACCTAGTCTCGGAGACATTACCAAGAATAGATTTGACATAGTGCCAGCCTCCATGAGAACACAGATTTTTAACAAAATTCAGAAATTAATCAGTGATACTTCCCAACAAAATAATGCTGAGGAATCTAGTCATATCACACCTTACCGTCACTCTCATGCTCCAGAAGTTAACATCCTTCGATCTTCCTTGAAACCTGGTACCTTAAAAGTTTAA 2124 0.4261 MLSNGQSRLKALVPLFLHEQQHFLLQHSSLHHQMPLSRKSLSSSSPSSSTHTTWTKQNDGDGKTVNSVHVRTLTRQRKLRHLSDQDIGLLHSTHSSPSSSSSSSSLPSSPELSLKSRSLGGGGSDHRSSSSAVPQPLPLPESWLTRRPESTNPISFELPGFPLSRKTVDHDGMTNTKPSQNLERSSLDPALGNAKYNLRVHIPAARFMAVSHDNGSESMPYLRLSVATKSSPPTSPVTCPCRSSNVEFLDPTITFPLEINDNLKMTVHSPDHSPLQCQLSLTRFFNPKSQEGSQHHKFLSSVWPENNHVDAAHPLPLPPRASSPPQLYMLHQLSTMHHATENLPSMKGQWQKGKLIGRGTFGSVYHAINLESGASCAVKEVDLIPDDPTSAECWKQQEQEIRILSQLHHPNIVQYYGSEIVGNHLNIYMEYVHPGSVNKFMREHSGAMTESVVRNFTRHILSGLAYLHSNKTIHRDIKGANLLVNESGIVKLADFGLAKILTGNSYELSLKGSPYWMAPEVMKAARNNESNPDLVMAIDIWSLGCTIIEMLTGKPPWSECEGPSAMFKVLQQSPPIPETLSSVGKDFLQQCFQRDPADRPSAARLLKHAFVQNLHDQDVLVHPQSYPRGGTGPGDNSPSLGDITKNRFDIVPASMRTQIFNKIQKLISDTSQQNNAEESSHITPYRHSHAPEVNILRSSLKPGTLKV* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02251 707 SMART serkin_6 350 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02251 707 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 41 621 - -
Rops9g02251 707 MobiDBLite consensus disorder prediction 89 185 - -
Rops9g02251 707 MobiDBLite consensus disorder prediction 89 115 - -
Rops9g02251 707 FunFam Mitogen-activated protein kinase kinase kinase 5 347 646 - -
Rops9g02251 707 Gene3D Transferase(Phosphotransferase) domain 1 347 627 - -
Rops9g02251 707 SUPERFAMILY Protein kinase-like (PK-like) 348 681 IPR011009 -
Rops9g02251 707 MobiDBLite consensus disorder prediction 122 136 - -
Rops9g02251 707 Pfam Protein kinase domain 351 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02251 707 MobiDBLite consensus disorder prediction 35 67 - -
Rops9g02251 707 ProSiteProfiles Protein kinase domain profile. 350 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02251 707 ProSitePatterns Protein kinases ATP-binding region signature. 356 379 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02251 Rops-Chr9 41651959 41657921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02251 73 613 MAP Kinase Kinase Kinase AT5G66850 45.095 5.56e-146 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops9g02251 Pkinase 4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02251 - - gmx:100819530 840.106